| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2144 |
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| Symbol | |
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| ID | 4076458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2250279 |
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| End bp | 2250836 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007464 |
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| Product | sarcosine oxidase, gamma subunit |
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| Protein accession | YP_614138 |
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| Protein GI | 99081984 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4583] Sarcosine oxidase gamma subunit |
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| TIGRFAM ID | [TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.945711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGAGA TCAAGATGCA ACTTGCCGCA AAATCCCCCT GTGAGGGGCT GTTGCCGCTG
ACCATAGGTG ATGTGACCCT TACCGAGGAC ATGCCCGCAG CCATGACGTT GATTGCGCCC
TACAAGGGGC GCAAGGACGC ATTGAGCAAG GCTCTGAACG CGGCGCATGG CATGGCGTTT
CCTGCGCCAA ATCGCGCGAC CGGCAAAGTC GGAGGGCGTG CCATCTGGTT TGGCCGGGCG
CAGGCTTTGC TGATCGGGCC CGCGGCTGAT CCGAGCCTTG CAGCGCATGC GGCTCTGACC
GATCTCAGCG ATGGCTGGGC GGTGGTGCGC CTAGAGGGGG ATCAGGCCGA GAATGTGCTG
GCCCGTCTCA TCCCCATTGA TCTGCGCGCC ACGGTGTTCA AACGCGGCCA CACTGCGCGC
ACCGAGATCA AGCACATGAT GGGATCGATC ACGCGCATTG GGCCAAAAGC GTTTCAAATC
ATGGTGTTCC GGTCGTTTTC TGAGACGCTG ATCCATGATC TGAAAAGAGC GATGGAAGCC
GTGGCGGCAC GGGGCTAG
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| Protein sequence | MAEIKMQLAA KSPCEGLLPL TIGDVTLTED MPAAMTLIAP YKGRKDALSK ALNAAHGMAF
PAPNRATGKV GGRAIWFGRA QALLIGPAAD PSLAAHAALT DLSDGWAVVR LEGDQAENVL
ARLIPIDLRA TVFKRGHTAR TEIKHMMGSI TRIGPKAFQI MVFRSFSETL IHDLKRAMEA
VAARG
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