| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2098 |
|---|
| Symbol | |
|---|
| ID | 4077849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 2203979 |
|---|
| End bp | 2204992 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638007417 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_614092 |
|---|
| Protein GI | 99081938 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4093] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.234685 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCG GTCTGAAGAT CCTGTTTGGG CTTTGTGTGG TCTGGTCGCT CTATTGGGCC
GTTGCCGCAT GGGGACTACG ACAGAGCGTT GCTGCCTGGT TCGAGGAACA GGCAGCGCGG
GGCTGGCAGG TGGAGGTCAA AGAGATCACC GCGGGGGATG GGCTTGGCGG CTATCCCTGG
CGGCATGTGA CCCAGATCAC GCAGCCCGCC CTCGCCGATC CCGGCACCGG GGCCGCATGG
CGTGCGGACT GGCTGGAGCT GCAGAGCCCC GCGATCTGGC CCGGCCACCA AAGCCTGCGT
TTTGCCGACG GCGACCAGCG CCTCTCCTAC TATGATCAGA CCGCGGTGAT CACGACCCAG
GGACTGCAGG CCGATCTGTT CCTCGCGCCA GGCCTTGCAC TGGAGCTCGA AGAACTGGGG
CTCACCTCGG GGAGCTGGCG CATTGGCGAC GACGCTGAAG CGACGCTCTC GGCGGATGAC
CTGAGCCTGC GCATGGTGCA GGGATCGGTG GCCGAGTCCT ATGAAATCAG CGCCGAGGCC
CGCGCCTTTC GCCCCGGCAA GGCGCTGCGC CGCCTGCTGC GCGCCGCGCC CAAACTGCCG
CAGGCCTTTG AAACCCTTAG CCTTGCGATG GATGTGACCT TTGACAAAGC CTGGGATCTC
TCCGTGCTGG AACACCGCCG CCCCCAGCCT CGTCAGATCG ACCTTGCGCT GCTGGAGGCT
CATTGGGGCG AGATGCGCCT CAAGATGTCG GGCGCGCTCG AGGTGGACGA GGCTGGCATT
CCCACCGGAG AAGTGGCCCT TCAGGTGGAA GCCTGGGCGG AGTTTCTGGC ACTGGCGGAA
GATTCCGGAT TGCTGAGCCC GACGCTGCGC GAGCAGGCCA GCCGGGTTGT GGCCGTGATG
GCGCGTGCGA GCGGCAACCC GGAGGATCTC GACATTACGC TGGGCTTTCG CAATGGCAAC
ATCACGATCG GCCCGATCCC CCTCGGTCCG GCGCCGCGAC TGATCATCCG CTAA
|
|---|
| Protein sequence | MKRGLKILFG LCVVWSLYWA VAAWGLRQSV AAWFEEQAAR GWQVEVKEIT AGDGLGGYPW
RHVTQITQPA LADPGTGAAW RADWLELQSP AIWPGHQSLR FADGDQRLSY YDQTAVITTQ
GLQADLFLAP GLALELEELG LTSGSWRIGD DAEATLSADD LSLRMVQGSV AESYEISAEA
RAFRPGKALR RLLRAAPKLP QAFETLSLAM DVTFDKAWDL SVLEHRRPQP RQIDLALLEA
HWGEMRLKMS GALEVDEAGI PTGEVALQVE AWAEFLALAE DSGLLSPTLR EQASRVVAVM
ARASGNPEDL DITLGFRNGN ITIGPIPLGP APRLIIR
|
|---|
| |