| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2072 |
|---|
| Symbol | |
|---|
| ID | 4077823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 2176058 |
|---|
| End bp | 2176528 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638007391 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_614066 |
|---|
| Protein GI | 99081912 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2983] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.78089 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAATC AGATCGACCG CAACGGGCTG ACGCCGAAGT TCTGGGAGAA GAAGCCCCTG
AAGACACTCT CGCAGCGCGA GTGGGAGGCG CTCTGTGACG GGTGCGGCAA ATGCTGTCTC
AACAAGCTGG AGGACGAGGA CAGCGGCGAG GTTGCGCTCA CCCGTGTGGC CTGTCGCCTG
CTCGACGATC AGAGCTGCCA ATGCGCGCAT TACGAGACCC GGCACAGCTT CATTCCCGAA
TGCATCGTGC TGAAACCTGA AAACCTGGAC ACCCACGCCT ATTGGATGCC CCAGACCTGC
GCCTATCGCC GACTTTGGGA AGGGAAATCC CTGCCCGACT GGCACCCGCT GGTGACGGGC
GATCCGGACA GCGTGCATCG CGCCGGGGTC TCGGTGCGCG GCATGACGGT GTCGGAATTC
GACACGCCGC TGGAGGAATG GGAAGACTAC ATTATCGAGG AACCGGTCTA A
|
|---|
| Protein sequence | MTNQIDRNGL TPKFWEKKPL KTLSQREWEA LCDGCGKCCL NKLEDEDSGE VALTRVACRL
LDDQSCQCAH YETRHSFIPE CIVLKPENLD THAYWMPQTC AYRRLWEGKS LPDWHPLVTG
DPDSVHRAGV SVRGMTVSEF DTPLEEWEDY IIEEPV
|
|---|
| |