| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2070 |
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| Symbol | |
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| ID | 4077997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2174017 |
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| End bp | 2175000 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007389 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_614064 |
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| Protein GI | 99081910 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.83599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCAC CAGATCAGGT CCATCCCCGC CCCCATATCG ACCCGGAACG TCTGACCCGC
GAGATGAACT GGAACCTCCT GCGCACCTTT GTAGTGCTGG CCGAGAGTGG CTCCATCACC
GAGGCAGCAG AGCGTTTGCG CCTGAAACAG CCCTCGGTTT CGGTTGCGCT CAAGAAGCTT
GAAGACCAGC TAGGGCAGCA CCTGATAGAT CGCTCGCCGG GGCATTTCAC CCTCACCAAG
GCCGGCCAGA TGCTCTACCG CGAGGCGGTC AACATCAACG GCTCCATCCT GCGGCTGGCG
ACCCTGATGC GCACCGTCAC CCCTGAAATC AGTGGCCATG TGCGAATCGC GGTGGCGAGC
CATGTGCTCT GCCCGCTGTT TGACAGTGTG ATCGGCGATT TTTACGCCGC GCACCCAAAG
GCCAGCCTTG CGATTGACGT GATCACCAGT GGCGATGCGA TCACCGCCGT GGCGGCCAAG
CGTGTGAGCT TTGCCCTCGC CCTTGTGCGC GAACAGGACC CAAACCTGCG CTATCTGCCT
GTCTACCGCG AAACCTTCGG ATTGTTCTGT GGCCCCCGTC ACCCGCTCTT TGGCCGCAGC
GATCTGACCC TTGAGGACCT GAAGGGCCAT GCGGCGGTGG TGTTTGACAA TGACCGCCTG
CAGGACGCGC TGCAGGATGT CACCCTCTTA CGGGCCCGCG CCGCCCTCGC ACCCGAGATC
ACGGGCGTTT CTGAAAACCT CGAGGAGGTC CGCCGTATGA TCATGGCAGG GCTTGGCATT
GGGCCTTTGC CCAAACATGT GGTCGCGCGC GACATCGAGG ATGGTCTGTT GTGGCAGGTC
CCTCCGTTCG AGGACCTGCC CGAAGTCGAC GTCTATCTGA TCTGGAACCC GACAACCGTG
CGCAACCGCG CCGAGGAAAC GCTGCTCACC ACTCTGATCG AGCGCCTCGA AACCGTCCCC
TTTGCCGAGC GTTCCTATGC CTGA
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| Protein sequence | MTPPDQVHPR PHIDPERLTR EMNWNLLRTF VVLAESGSIT EAAERLRLKQ PSVSVALKKL
EDQLGQHLID RSPGHFTLTK AGQMLYREAV NINGSILRLA TLMRTVTPEI SGHVRIAVAS
HVLCPLFDSV IGDFYAAHPK ASLAIDVITS GDAITAVAAK RVSFALALVR EQDPNLRYLP
VYRETFGLFC GPRHPLFGRS DLTLEDLKGH AAVVFDNDRL QDALQDVTLL RARAALAPEI
TGVSENLEEV RRMIMAGLGI GPLPKHVVAR DIEDGLLWQV PPFEDLPEVD VYLIWNPTTV
RNRAEETLLT TLIERLETVP FAERSYA
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