Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2042 |
Symbol | hisE |
ID | 4077969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2148721 |
End bp | 2149038 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638007360 |
Product | phosphoribosyl-ATP pyrophosphatase |
Protein accession | YP_614036 |
Protein GI | 99081882 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0140] Phosphoribosyl-ATP pyrophosphohydrolase |
TIGRFAM ID | [TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTGC TGCACGACCT CGAACAGACC ATTCTGTCCC GCAAGGGCAC CGATCCCGAC ACCAGCTGGA CCGCGAAGCT CTTGTCCAAG GGGCCGGAGA AATGCGCCGA AAAATTTGGC GAAGAAGCCA TCGAAGCCAT CATCGAAGCG GTGAAGGACG ACAAAGCCAA GCTCGCCTCT GAGGGCGCGG ATGTGCTCTA CCATTTTCTG GTGATGCTGG CAGCGCGGGA TGTGGCGTTG GACGATGTTC TGACTGTGCT TGCTGAGCGG CAGGGTCTGA GCGGCCTTGC GGAGAAAGCC GCCCGTCCCA AAGGCTAG
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Protein sequence | MTLLHDLEQT ILSRKGTDPD TSWTAKLLSK GPEKCAEKFG EEAIEAIIEA VKDDKAKLAS EGADVLYHFL VMLAARDVAL DDVLTVLAER QGLSGLAEKA ARPKG
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