Gene TM1040_2042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2042 
SymbolhisE 
ID4077969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2148721 
End bp2149038 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content60% 
IMG OID638007360 
Productphosphoribosyl-ATP pyrophosphatase 
Protein accessionYP_614036 
Protein GI99081882 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0140] Phosphoribosyl-ATP pyrophosphohydrolase 
TIGRFAM ID[TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTGC TGCACGACCT CGAACAGACC ATTCTGTCCC GCAAGGGCAC CGATCCCGAC 
ACCAGCTGGA CCGCGAAGCT CTTGTCCAAG GGGCCGGAGA AATGCGCCGA AAAATTTGGC
GAAGAAGCCA TCGAAGCCAT CATCGAAGCG GTGAAGGACG ACAAAGCCAA GCTCGCCTCT
GAGGGCGCGG ATGTGCTCTA CCATTTTCTG GTGATGCTGG CAGCGCGGGA TGTGGCGTTG
GACGATGTTC TGACTGTGCT TGCTGAGCGG CAGGGTCTGA GCGGCCTTGC GGAGAAAGCC
GCCCGTCCCA AAGGCTAG
 
Protein sequence
MTLLHDLEQT ILSRKGTDPD TSWTAKLLSK GPEKCAEKFG EEAIEAIIEA VKDDKAKLAS 
EGADVLYHFL VMLAARDVAL DDVLTVLAER QGLSGLAEKA ARPKG