Gene TM1040_2029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2029 
Symbol 
ID4077486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2137758 
End bp2138666 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content54% 
IMG OID638007344 
Producthypothetical protein 
Protein accessionYP_614023 
Protein GI99081869 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.721418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.623981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG AGACGACCGG ACAGCTCCCG GATGTTCTGT GGCATTACAC GACATTCGAT 
ACGCTTACGG CGATTCTTAC TTCTCAATGC CTTCTGGCCA GCGACTTTCG CGACACCAAC
GACCGCGAGG AAATCCTGTT TGGTTTCAAA GCCCTGCGAG ACGCGTTTGG GACTCACAAC
ACTTGGAACA CCACTGAAGG CTTTGCAGAT CCCGTGTCTG CAGCAATCCG AGAGAACGAG
GAGCGTATCA TAGAGGACCT GGAATCTAGC TTCTTGCACG GTCAGATGAT CTGTCTGTCC
AGCGCAAGGG ATTCCCTGTC GATGTGGCGC GGATACGGTC AGCTCACCAA TGGCGGCGGC
AATGGCGCAG TGGCGATCGG GTTTTGCGCT GCAGACCTGC AAACCTTCTG TGGCCCAAGC
GATGCAACGC TTCAATCTTC GACCGCGCAC ATCCAGCAAA ACGCCTCAGG TGGGTTTGAA
GGGCCAAGCA ATGTTGACTA TGCCTTCAGA AATTTCCCGC AACTTTCAAA TGCACTTTCA
AACGAGGATT ACTCGGCCGA CTTTCACCTC AAGTGGACGC ATTACTTGGC CCATTGGATG
AAGCACCGCA AACATCCCGC ATTTGCCGAA GAACGAGAGT ATCGAATTTG GGGGCATGCC
TATGACGGCA ACGACAAAGG TAACAGCCAA CACGTAGTCT TTGTCGGCAA CCACGATCGC
CGCAAATTCC ACTTGGCGCC GGCACCGGAC GACATCCTCG GGCCGCTCAC ACATCCGTTG
GCCATCCAGA AGATCATGGT CGGGCCAAAA ACCGACTTCG CAAAAGTCGA GCGTTTCACC
AGAAACGTCT TCCAATCTTA CACCCACGAT CGGCCCGATA TGTGCGCCTC AAAAATTCCC
TTCAAATAG
 
Protein sequence
MSEETTGQLP DVLWHYTTFD TLTAILTSQC LLASDFRDTN DREEILFGFK ALRDAFGTHN 
TWNTTEGFAD PVSAAIRENE ERIIEDLESS FLHGQMICLS SARDSLSMWR GYGQLTNGGG
NGAVAIGFCA ADLQTFCGPS DATLQSSTAH IQQNASGGFE GPSNVDYAFR NFPQLSNALS
NEDYSADFHL KWTHYLAHWM KHRKHPAFAE EREYRIWGHA YDGNDKGNSQ HVVFVGNHDR
RKFHLAPAPD DILGPLTHPL AIQKIMVGPK TDFAKVERFT RNVFQSYTHD RPDMCASKIP
FK