Gene TM1040_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2009 
Symbol 
ID4077466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2114021 
End bp2114866 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content66% 
IMG OID638007324 
Productdienelactone hydrolase family protein 
Protein accessionYP_614003 
Protein GI99081849 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC GCTTCATCCC CGCCACGCCC GCCGCGCGCC CCATCGACCA GGATGACCCG 
CTTGAGGATT TCGAGCGCCG CGAGGTCGCG CTTCTCGGCC TCACCAAGAC GGTCTATGTG
GCGGGCGCGG GTCCCGCGGT GATCGTGATG CACGAGCTGC CGGGGATCTC GCCGCAAGTG
GCCCGCTTTG CGCGATGGGT CAGGGAGGCC GGCTTCACCG TCTACATGCC CTCGCTTTTT
GGGCGCGATG GCGCCGTCGC ACAGGCCGAC GAAGGCGCAG AGGTCTTTAA ACGAGTCTGC
ATCTCGCGCG AGTTTCGGGT CATGGCGGGG ATGGGCACCA GCCCGGTTGT GGCATGGCTG
CGCGCCCTCG CCAGCGAGGC TCATGAGGCC TGTGGCGGTA TCGGCGTCGG CGCCGTTGGC
ATGTGCCTCA CTGGAAACTT CGCGCTCTCG ATGATGATCG AACCCGCCAT GCAGGCCCCC
GTGCTCTGCC AGCCATCGCT CCCGCTTGAC GATCCGGGCG CCATTGCCAT GAGTGACGAA
GAAGCCGCCG CCGTCCGCGC ACGCATGGAT CAGGACGATC TGACCGCACA GCTCTACCGG
TTCGAAGGGG ACAGCTTCTG CCGCGCGGAG CGGCTCGCGG CCTATTTCGA CCGGTTTGGG
GACCGCCTCA CGGAGAAAAC CCTGCCCGAC AGCGCCGCCA ATCCGTCTCC CGCGCCCTTC
TTCAACGCCC ATGTGCCAAC ACCGCATTCG GTTGTCACAC AGCACCTGAT CGATGCAGCC
GGAACAGAAA CCGTCAAGGC CGTCGAGGAG ATTATCGCGT TTCTGCGCAG CCGGTTGCAC
CCCTGA
 
Protein sequence
MTTRFIPATP AARPIDQDDP LEDFERREVA LLGLTKTVYV AGAGPAVIVM HELPGISPQV 
ARFARWVREA GFTVYMPSLF GRDGAVAQAD EGAEVFKRVC ISREFRVMAG MGTSPVVAWL
RALASEAHEA CGGIGVGAVG MCLTGNFALS MMIEPAMQAP VLCQPSLPLD DPGAIAMSDE
EAAAVRARMD QDDLTAQLYR FEGDSFCRAE RLAAYFDRFG DRLTEKTLPD SAANPSPAPF
FNAHVPTPHS VVTQHLIDAA GTETVKAVEE IIAFLRSRLH P