| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1995 |
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| Symbol | |
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| ID | 4077452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2099764 |
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| End bp | 2100681 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638007310 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_613989 |
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| Protein GI | 99081835 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.447756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGCAG GGGACATTGC ATCCACAGAG CAAAGCCGCG CGGCAGAGCT CGAGGCGGCG
GGCGGACTTC GGGTGCCGCA GTTGTTTAGC GACCTGCCAG AGGCCGTGAT CGTGGCGGAT
CATGCGCGCA GGATCTCTTG GGTCAACCCG GCCTTTGAGC GACTGTTCGG CTATGCGCTC
AGCGATGTAC GCGGGCGAAC CACCGAGTTC CTTTATGCCT CACATGAGAG CTATCTTGAA
AAAGGCAGGG CGCATTTCAG CGCTGTGCCT TCGGCATCGG ACCACAGCTA TGAAGTGACC
TATCGCAGGC GCAATACCGA GACCTTCCTG AGCCAGACCA CCGGTGGCCC GATCCGGGGC
GCAGATGGGG CGCCTGTTGG CTATCTTGCT GTGATCAAAG ACATTTCCCA AACGCGCCTG
TTTGAGACCT TGCTCAGGGT GTTGTTTGAC ATCACCACCA ACCAGGCGCT GTCGCGCGAT
GAAAAGGTTC ATGAAATCCT CAAGCTGGGA TGCGAGCGGT TTCAGACCAT GTCCGCGATT
ATCAGCTGTG TGCAAGGGCA GACTTATACG GTGTCGTATT GCTATTCGCA TGAGGCGCCG
GTCGAACCGG GTACCCGATT TGAGCTCGGC GAGACCTATT GCGCGCAGAC GCTCACGGGC
GAGGGGCCGG TTGCCTATCA TCGCGCTTCG CAGTCCGGGA TCGCCTCGCA CCCGTGCTAT
GACATGTTCC TACTTGAAAC CTATATCGGG GTGCCGTTGA TCGTGGATGG CCATGTCTTT
GGCACGCTCA ACTTCACGTC ACCAGAGGCG CGCGCGCCCT TTGAGCCGAT GGACCTGGAG
CTAATCAAGC TGTTTGCGGC CTGGGTGTCG CAGCAGTTGA GCATCGATGC GGCGCTCTCG
GCTGCAAAGC TGAGATAG
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| Protein sequence | MNAGDIASTE QSRAAELEAA GGLRVPQLFS DLPEAVIVAD HARRISWVNP AFERLFGYAL
SDVRGRTTEF LYASHESYLE KGRAHFSAVP SASDHSYEVT YRRRNTETFL SQTTGGPIRG
ADGAPVGYLA VIKDISQTRL FETLLRVLFD ITTNQALSRD EKVHEILKLG CERFQTMSAI
ISCVQGQTYT VSYCYSHEAP VEPGTRFELG ETYCAQTLTG EGPVAYHRAS QSGIASHPCY
DMFLLETYIG VPLIVDGHVF GTLNFTSPEA RAPFEPMDLE LIKLFAAWVS QQLSIDAALS
AAKLR
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