| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1984 |
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| Symbol | |
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| ID | 4077168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2088076 |
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| End bp | 2089935 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638007299 |
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| Product | ABC transporter related |
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| Protein accession | YP_613978 |
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| Protein GI | 99081824 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.434554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACGC AATACATGTC ATCGCGCAAA TTGTTGCGCT GGCTCTGGCG CGGCTACCTG
CGGCACCACG TCGGACTATT GGCGATTGCT GTCTTCTTCA TGCTGCTCGA GGGCGCCTCC
GTGGGCGGGC TCAGCTACAT GATGCAGCCG ATGTTTGACC TCGTGTTTGT GGACGGCAGC
GAAAACGCCC TCATCTGGGT GAGCGTTGCG TTTTTTGCCA TCTTCGTGCT GCGCGGCTTC
AGTTCGGTAA CGCAGCGGGT GATCCTCGCC ACGATCAACC AGCGGTCCGA GGCGCATATG
CGCACGGATA TGCTCGAACG GCTGATCCAT CAGGACGCGA GCTTTCACCA GCATCACCCG
CCCGGCTTCT TGATCCAGCG CGTGCAGACT GACGTCGCGG CGATCAACCA GGTCTGGCAG
GCGATCATCA CCGGCTCGGG ACGCGATGTG GCGCAGCTTG TTGCAGTGCT GACCGTCGCT
ATCAGCGTCG ACTGGCGCTG GACCCTGATC ATGCTGATCG GCGTGCCGCT TCTGGTGTTG
CCGCTCTCGA TCGTGCAGCG GTATGTCCGC AAGAAAGCCA GCCTTGCTCG CGACCTTGGC
GCAGTGCAGG CGACCCGTCT CGACGAGGTC TTCCACGGTA TCGTCCCGAT CAAGCTCAAC
CGGCTTGAGG ACTACCAGAG CGGGCGTTAC CGCTCGGCAA CTGCGGCCTT TGTCCGGGCG
CAGATCAAGG CGGCCCTCGG CGCCTCCTCG ACCACGGGGA TGGTGGATCT GATGGCTGGT
TTCGGGGTCA TGTGCGTGAT CCTCTTTGGC GGGCGCGAAA TCATCGACGG CGACAAGACC
GTCGGCGAAT TCATGAGCTT TTTCACCGCC ATCGGCCTCG CCTTTGACCC GATGCGCCGC
CTCGCCGCTA TCATGGGCAT CTGGCAGGGC GCCGCCGCCG CGATGGAGCG GATCAAGGAG
CTGATGGATG AACCCATCAC GCTCGTGTCC CCGGAACACC CCAAGCCCGC CCCCAAAGGG
CTGCCCGAAA TCCGTCTTGA TAACGTGAAC CTCTATTATG GCGAGGCGCA TATCCTGCGC
GATCTGTCAC TGGTGGCCGA AGCCGGCAAG ACCACCGCGC TGGTGGGCGC CTCCGGTGCC
GGGAAATCCA CCATTTTCAA CATCCTGACC CGGCTTGTTG ATCCCCAGAC CGGCTCTGTG
ACCCTGGATG GCACTGAGGT GCGGGATCTT GATCTGGGCG ATCTCAGGGA TCTCTTTTCC
GTGGTCACCC AGGACGCGCT GCTGTTTGAC GAGACGCTGC GCGAGAACAT CCTTCTGGGG
CGCACGGATG TGAGCGAAGA ACGCCTTGCA GAGGTTCTGG ATGCCGCTCA TGTGTCGGAC
TTTCTGCACA AGTTGCCCGA AGGGCTCGAA ACCCGCGTGG GCCCGCGCGG CTCGGCGCTC
TCGGGGGGGC AGCGTCAACG CGTGGTGATC GCCCGCGCGC TCTTGCGGGA CACGCCGCTC
CTGCTGTTGG ACGAGGCCAC CTCGGCGCTG GATGCTCAAT CCGAGAAAGT GGTGCAAAAG
GCGCTCGAGA AACTCTCTGG TGGGCGCACG ACAATCGTGA TCGCGCACCG TCTTTCGACC
ATCCGCTCGG CGGACAAGAT CGTGGTGATG GAGCGCGGCC GCGTGATGGA TCAGGGCCGC
CACGAGGAGC TGCTGGAGCG CGGCGGGATC TATGCAGATC TCTATCGTTT GCAGTTCCAG
GACGGGAAAA CCGTGATCGA CACCGATGGG ATGAACGCCC AGATCGCGCA GAACGACAAT
CGCAACGCAC GCGAGGAAAC CGGCCTTCTA CGCCGCTTTG CCCGCCGCCT CTTTGGCTGA
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| Protein sequence | MSTQYMSSRK LLRWLWRGYL RHHVGLLAIA VFFMLLEGAS VGGLSYMMQP MFDLVFVDGS
ENALIWVSVA FFAIFVLRGF SSVTQRVILA TINQRSEAHM RTDMLERLIH QDASFHQHHP
PGFLIQRVQT DVAAINQVWQ AIITGSGRDV AQLVAVLTVA ISVDWRWTLI MLIGVPLLVL
PLSIVQRYVR KKASLARDLG AVQATRLDEV FHGIVPIKLN RLEDYQSGRY RSATAAFVRA
QIKAALGASS TTGMVDLMAG FGVMCVILFG GREIIDGDKT VGEFMSFFTA IGLAFDPMRR
LAAIMGIWQG AAAAMERIKE LMDEPITLVS PEHPKPAPKG LPEIRLDNVN LYYGEAHILR
DLSLVAEAGK TTALVGASGA GKSTIFNILT RLVDPQTGSV TLDGTEVRDL DLGDLRDLFS
VVTQDALLFD ETLRENILLG RTDVSEERLA EVLDAAHVSD FLHKLPEGLE TRVGPRGSAL
SGGQRQRVVI ARALLRDTPL LLLDEATSAL DAQSEKVVQK ALEKLSGGRT TIVIAHRLST
IRSADKIVVM ERGRVMDQGR HEELLERGGI YADLYRLQFQ DGKTVIDTDG MNAQIAQNDN
RNAREETGLL RRFARRLFG
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