| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1981 |
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| Symbol | |
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| ID | 4077165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2084941 |
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| End bp | 2086053 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638007296 |
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| Product | histidinol-phosphate aminotransferase |
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| Protein accession | YP_613975 |
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| Protein GI | 99081821 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
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| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.413428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACA GCCGCCAAAC CCCGCTCGCC CAATCCCTGC CCGCTTCGGT GCCCTTTGTT
GGCCCCGAGA CCCATGAACG CCAGCGCGGC GCGCCTTTTG TGGCGCGGCT CGGTGCAAAT
GAGAACCTCT TTGGCGTCTC CCCCAAGGCG ATTGCCGCCA TGCAGGCCTC AGCGGCAGAG
ATCTGGAAAT ACGGCGATGC AGAGAGCTAC GAGCTGCGCG CGGCCCTCTC GGCGTTGCAT
GGCATTGCAC CCGAACACAT CATGGTTGGC GAGGGCATCG ACGGCCTCCT GGGCAATCTG
GTGCGGCTTT ATGTCGGCGC CGGCGATGCT GTGGTGACAT CGCTGGGGGC CTATCCGACC
TTCAACTATC ATGTGGCCGG TTTTGGCGGC GACCTTCACA CTGTGCCCTA CAAGGACGAC
CACGAAGACA TCAAAGCCCT GATGGCCAAG GCACATGAGG TGGGCGCAAA GCTGGTCTAT
CTCGCCAATC CTGACAATCC GATGGGCAGT TGGCATCGCG GTGCAGATAT TGTCGCCGCA
CTTGACGACC TGCCCGAAGG CAGCCTCTTG GTGCTGGATG AGGCCTATGT GGAATGCGCG
CCCAAAGGCA CCGCCGCCCC GGTCGATGTG ACCGACCCGC GCGTGATCCG CATGCGCACC
CTCTCCAAGG CCTATGGCAT GGCGGGGGCA CGCGTCGGCT ATGCCATGGG GGCGGTTGAA
GTCATCTCCG CCTTTCACAA GGTCCGCAAT CACTTTGGCA TGAACCGCTG CGCACAGATC
GGCGCAACCG AGGCCATCAA GGATCAGGCA TGGCTGGCTC ATGTGCAGGC CGAGATCGCC
ACCGCACGCG AAGAGATCTC GCGCATCGCT CGCGAAAACG GCCTCACACC GCTGCCTTCC
GCGACCAACT TCGTCGCCAT AGACTGCGGT CGCGATGGCG CCTTTGCCAA GGCGGTCTTG
GAGGCGCTGG TGGCGCGGGA CATCTTTGTG CGCATGCCAT TTGCAGCCCC GCAAAACCGC
TGCATCCGCG TCAGCTGCGG CCCCGAAAGA GAGCGCCGCG CCTTTGCCGA GGCCCTGCCG
CTGGCCCTCA AAGACGCGCA GAACGGCGCC TAA
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| Protein sequence | MTDSRQTPLA QSLPASVPFV GPETHERQRG APFVARLGAN ENLFGVSPKA IAAMQASAAE
IWKYGDAESY ELRAALSALH GIAPEHIMVG EGIDGLLGNL VRLYVGAGDA VVTSLGAYPT
FNYHVAGFGG DLHTVPYKDD HEDIKALMAK AHEVGAKLVY LANPDNPMGS WHRGADIVAA
LDDLPEGSLL VLDEAYVECA PKGTAAPVDV TDPRVIRMRT LSKAYGMAGA RVGYAMGAVE
VISAFHKVRN HFGMNRCAQI GATEAIKDQA WLAHVQAEIA TAREEISRIA RENGLTPLPS
ATNFVAIDCG RDGAFAKAVL EALVARDIFV RMPFAAPQNR CIRVSCGPER ERRAFAEALP
LALKDAQNGA
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