| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1920 |
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| Symbol | |
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| ID | 4076871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2021537 |
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| End bp | 2022229 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638007236 |
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| Product | beta-lactamase-like |
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| Protein accession | YP_613915 |
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| Protein GI | 99081761 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.74415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTGA TCTGGCTCGG TCATGGCGGC TTTCGTCTGG AAACAGGCGA GACCACCCTT
CTTATCGACC CTTGGCTCAC CGGCAATCCG ATGCTCGAAG ACAGTCAACA TGACGCGGCA
ACCCAAGGGG CCACCCATAT CCTGTTGACC CATGCGCATT TTGATCATGT GGCGGATGTG
CTGGAGCTGG CAAAACACCT CTCGGTGCCG ATCGTTGGCC AATATGACCT GATGGGATAT
TGGGGCGAAA CCGAAGGCGT GCAGACCGTG GGCTTCAACA AGGGCGGCAC TGTCACGGTC
GGGGACACGC GCGTCTCAAT GGTGCCGGCC TCCCATTCCA ACACGTTTTC CACCCGCGAC
GGGCTGCGCA CTGCGGGCAG CGAAGTGGGC TACATGATCC GGGCAGAAGG GAAGACGCTC
TATGTGTCGG GCGACACCGA CATCATGGCC GACATGGACT GGATGGGGGA CTACTACAAA
CCCGAGATCG GCATTCTGTC GGCGGGGGGG CATTTCACCA TGGATATGAA GGCCGCCGCC
TATGCCGCGC AACGCTATTT TGCCTTTAAA ACGGTCATCC CCTGCCACTA CCGAACATTT
CCATTGCTGG AACAGAGCGC ACAAGACTTG ATTGATGGGC TTCCCGGCGT CAACGTCATC
GAGCCACAGA TTATGAAAGA CATCGAACTC TAA
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| Protein sequence | MKLIWLGHGG FRLETGETTL LIDPWLTGNP MLEDSQHDAA TQGATHILLT HAHFDHVADV
LELAKHLSVP IVGQYDLMGY WGETEGVQTV GFNKGGTVTV GDTRVSMVPA SHSNTFSTRD
GLRTAGSEVG YMIRAEGKTL YVSGDTDIMA DMDWMGDYYK PEIGILSAGG HFTMDMKAAA
YAAQRYFAFK TVIPCHYRTF PLLEQSAQDL IDGLPGVNVI EPQIMKDIEL
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