| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1815 |
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| Symbol | |
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| ID | 4076961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1907502 |
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| End bp | 1909253 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638007130 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_613810 |
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| Protein GI | 99081656 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.308963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAATC CTCGACACCC CCGTCTCGCG CTGGTCGCCA GTGTTGTGCT CTTCATTGTC
GTGCTCTCTG CGGTGGTCTG GTCTTCGGCC TATCGACAGG CGCTGACGGC GCTGGCCGAA
CGCAGCGCCT CTGATCTCGC GCTGGCCTCG GATCGGGTGA GCACGCAGTT GCAGATTTTC
CGCGAGCAGG CGGTTCTGGT TGTAGAGCAC CCGGCGTTGC AGGCGCTCGA AACCCGCGAG
GGACCGGCAC GCGCCACAGC GCTCTTGCGC CGGATCGCGG ATAAATCCGG CGCACTTGAT
GTGTTTTACG CCGATGACTC GGGGCGCGTG CTGGCCGCCG CCGAAGGCGT GGCTGGTTCA
AACGTCTCGG GTCGGCGGTA TTTTCGGCGC GCGATGCAGG GGGCGATGGG CACGGAGCCC
ATGGTGCTAC CCGAGAGCAA GCGACGGGCC TATTTCTTTG CCGCGCCGGA TTTCGGCCCG
GATGGGCGCG TGCGGGGCAC ATTGGTGGTT GTTGCGGACA TCGAGCTGGT GGAGCAGACG
TGGCGCGGCA CCCTGCCGCC GGTCTATTTC ACCATCGAGG ACGGACGCGT CTTTATCTCC
AACCGGTTTG AGCTGCTGTT CTGGCGACTG GATGACGACA AGACCGGGCT GATGACCGCA
GATGGGGGCG ATTTGCCGCT CGAGGTGAAA AAAGTGGGCG AACACGAGAT CTGGCAACAG
CGTTGGAGCC CGTATTTGCC CGATGAGGCG CTTCATCTCG GGATCGGTCT GCCCGCCATC
GGGATGCGCG GAGAGATCCT CGTGGATGTG ACCCCAGCGC AGCGGATCGC GGCGCTGCAG
ACCATGGCGA TGGCTGCGGT CTGTCTTGCG TTTGGCACCA TCCTGTTCTG GCTGGCAGAG
CGGCGCCGCA CGCTGGCAAA GGCCAATGCG GAACTGGAAG AGCGTGTCGA GACGCGCACC
CGGGCGCTGT CGGACACCAA CCTGCAGCTG CGCCGCGAGG TGCGCGAACG CAAGGAGGCG
GAGGCCGCAT TGAAACAGGC GCAGGCCGAA CTGGTGCAGG CCGACAAGCT CTCGGCGCTG
GGGCAGATGT CGGCTGGCAT CAGTCATGAG CTCAACCAGC CCTTGATGGC GATCCAGCAG
TTTGCCGAGA ACGGTCAGGC CTTTCTGGAG CGTGGCAAAT CGGAACGCGC GGGCGAGAAC
CTCACCCGGA TTGCGCAGAT GTCGGCCCGG ATGGCGCGCA TCATCAAGAA TCTGCGCGCC
TTTGCCCGCA ACGAGAGCGA GCCGGTGGGG CGCGTGGATC TGGTGCAGGT CATCGAGGCG
GCGGTGGAAC TGACAGAGAC CCGCCTGCGC GACCATGACG TGACGCTGGA CTGGCAACGC
CCGGAGGCGC AGTCCGTCTG GGTGCGCGGT GGCGAGGTGC GGCTGACGCA GGTGTTTGTG
AACCTCATCA ACAACGCCGT GGATGCGATG ATGGGACAGG AGGAGCGCCG CGTGCGGATC
GTCATCAACG ATGGCGCGCG GCTCACGGTG GGCGTGCGCG ACATTGGCCC CGGTCTGAAA
CAGCCCGAAA AGGTCTTTGA GCCGTTCTAC TCCACCAAGG CGGTGGGGAG TTCGGAAGGC
ATGGGGCTGG GGCTGTCCAT TTCCTACGGA CTGGTGCAAA GCTTTGGCGG CAATATCCGG
GGCACCAACA CAGAGCACGG CGCCCTGTTC ACGGTCGAAC TGGACTACTG GAAAGAGGAA
ACCGCCGCAT GA
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| Protein sequence | MLNPRHPRLA LVASVVLFIV VLSAVVWSSA YRQALTALAE RSASDLALAS DRVSTQLQIF
REQAVLVVEH PALQALETRE GPARATALLR RIADKSGALD VFYADDSGRV LAAAEGVAGS
NVSGRRYFRR AMQGAMGTEP MVLPESKRRA YFFAAPDFGP DGRVRGTLVV VADIELVEQT
WRGTLPPVYF TIEDGRVFIS NRFELLFWRL DDDKTGLMTA DGGDLPLEVK KVGEHEIWQQ
RWSPYLPDEA LHLGIGLPAI GMRGEILVDV TPAQRIAALQ TMAMAAVCLA FGTILFWLAE
RRRTLAKANA ELEERVETRT RALSDTNLQL RREVRERKEA EAALKQAQAE LVQADKLSAL
GQMSAGISHE LNQPLMAIQQ FAENGQAFLE RGKSERAGEN LTRIAQMSAR MARIIKNLRA
FARNESEPVG RVDLVQVIEA AVELTETRLR DHDVTLDWQR PEAQSVWVRG GEVRLTQVFV
NLINNAVDAM MGQEERRVRI VINDGARLTV GVRDIGPGLK QPEKVFEPFY STKAVGSSEG
MGLGLSISYG LVQSFGGNIR GTNTEHGALF TVELDYWKEE TAA
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