| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1777 |
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| Symbol | pyrE |
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| ID | 4076806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1870640 |
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| End bp | 1871320 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007092 |
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| Product | orotate phosphoribosyltransferase |
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| Protein accession | YP_613772 |
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| Protein GI | 99081618 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0461] Orotate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.693313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.186434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCCCCT CCTCCTACCC CTCCGCCGAA GAAATTGCCC GCCTCTCTGC CCGCATGCTC
TTGGAAATCG GCGCGGTGAA CTTCAACACC GATGAACCCT ACACGCTGGC TTCGGGCCTG
CCGTCGCCGA GCTACATCGA CTGCCGCAAG CTGATTTCCT TCCCGCGCAT CCGCTCCACC
CTGATGGATT TCATGGCTGT CACGGTGATG CGCAACGCAG GCTTTGAGGC CTTCGACAAT
ATCGCGGGCG GCGAAACCGC AGGCATCCCC TTTGCCGCGC TGGTGGCCGA ACGCCTCGCC
CTGCCAATGA CTTATGTGCG TAAAAAACCC AAAGGCTATG GCCGCAATGC CCGTATTGAG
GGCGCCATGT CCGAAGGCGA GCGCGTCCTG CTGGTCGAAG ATCTGACAAC CGATGGCGGT
TCCAAGCTTT CTTTCGTGGA CGCGATCCGC GAAACCGGTG CCACCTGCGG GCACACGGCG
GTGATCTTCT ATTACGACAT CTTCCCCGAG ACCACAAAAA CGCTCGGCGA TCACGGCGTA
CAGCTGCATT ATCTCTGCAC CTGGTGGGAT GTGCTGGCCG AGGCGCGCGC GCAGGCTGCC
TTCAGCACCG AAACCCTTGA CGAGGTAGAG AAATTCCTGC GTGATCCGCG CGCCTGGCAA
GAGGCCAACA AGAAGACCTG A
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| Protein sequence | MIPSSYPSAE EIARLSARML LEIGAVNFNT DEPYTLASGL PSPSYIDCRK LISFPRIRST
LMDFMAVTVM RNAGFEAFDN IAGGETAGIP FAALVAERLA LPMTYVRKKP KGYGRNARIE
GAMSEGERVL LVEDLTTDGG SKLSFVDAIR ETGATCGHTA VIFYYDIFPE TTKTLGDHGV
QLHYLCTWWD VLAEARAQAA FSTETLDEVE KFLRDPRAWQ EANKKT
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