Gene TM1040_1754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1754 
Symbol 
ID4075818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1846069 
End bp1846413 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content57% 
IMG OID638007068 
Producthypothetical protein 
Protein accessionYP_613749 
Protein GI99081595 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.772232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAATT TCGGATGCGC GACACCACAT TGGACGGGCC TTCACGGCAC GTCATACCAA 
ATTCAAGATG AGAACATGAT AGAGATTTTT TGGGGACCGA AGATGGTCCT GACCGAGATT
GAAACCGGAA CTCAAGAGGC CTTTGGCACC ATTGAAAAGG CGCACCATTG GCTCAGCCGC
AAATGGCCTG TTGCAGATTC CGCGGCCCGA GCTGCACTGG CCCAAGTCGA AGCCGCGATG
GAATGCATGG GGTCCGTGCA GGACGCAAGA TCGGCATTTC AAGACGCCGC CTGCAGCGCC
GGGTTTCACA TTGCAGATCA AAGCGCGCAG CCCCTGGCGT CATAG
 
Protein sequence
MRNFGCATPH WTGLHGTSYQ IQDENMIEIF WGPKMVLTEI ETGTQEAFGT IEKAHHWLSR 
KWPVADSAAR AALAQVEAAM ECMGSVQDAR SAFQDAACSA GFHIADQSAQ PLAS