| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1737 |
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| Symbol | |
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| ID | 4075801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1832077 |
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| End bp | 1833159 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638007051 |
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| Product | high-affinity nickel-transporter |
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| Protein accession | YP_613732 |
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| Protein GI | 99081578 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.284781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGCACC TCCCAGGGAT TGTGTTGGCG ATCACGCTGG TTGCCCTTGC TGCGCTTGCG
ATCTGGCTCT GGGGGCTTGG CGGCGCGGAT CATATCCTGC GCGCGGCTTC CGAGGCGCAG
CGTGATGCGC AAAACGCGAT GGCACGGGGA TTGCGCGCGC TGAAAGGCGG CCAGCCCGGC
GCATGGTGGG GGCTCATGGG GGTCTGTTTT GCCTATGGTT TTTTTCATGC GGCAGGTCCG
GGCCACGGCA AGCTGGTCAT CGGCGGCTAT GGTCTTGGCA GTGCGGTGAC GCTTTGGCGG
CTTTCGGCGC TGGCGGTGGC GTCGTCGCTG GCGCAGGCGG CGACTGCGGT GCTCTTGGTG
CTGTCTGGTG TGTGGCTGTT TGATTGGGGG CGAGAGCGCC TGACGGCTAC GGCAGAGGAT
CTGTTGGCAC CGGTGTCTTA TGCGCTGATG GCGCTTTTGG GCCTTTATCT GCTCTTGCGT
GGGTTGCGAC GGGGCTGGCG GCTGCGCGCG GCTGAGGCCG GGCCGCACGC ACATGCGGAT
CATCACCACG TGCCTGCAGG GACAGGTGGT GCGCAGGACC ATGCGCCTGT CGCCCTCCAG
AGTGTCGGGA CGCATCATAA CCATCATCAT GACCATCAGC ATCATGACCA TGATCACCAC
GATCATCATG ACCACGGCCA CAACCATCAC GCCCATGGTC CGGGCGAAGT TTGCGCCAGT
TGCGGCCATC GCCACGGCCC AACCCTGCAG GAAGCGGCAA GCCTGCGCTC TTGGCGCGAG
GCCGTGGCCA TCATTCTGAG CATTGCCGCG CGGCCCTGCA CAGGGGCAGT GTTCCTGCTC
CTGCTGACCT GGAGACTGGA TGTGCTCGGG GCCGGTGTGG CTGGGACTTT TGCGATGGGG
CTTGGGACAG CGAGCGTCAC CCTCTGCGTC GCGCTTCTCG CCGCTGGCGT ACGTGGCGGG
CTCCTTATGC GGGTGCTTTC GGCGGGGGGC AATCGCGGCG CGCAGATGGC GGCCGCCCTC
GAGATTGCCG CCGGGGCGCT GGTGCTGGCG CTCTGTCTGC AGCTGTTGCT GCGCAGCCTC
TGA
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| Protein sequence | MRHLPGIVLA ITLVALAALA IWLWGLGGAD HILRAASEAQ RDAQNAMARG LRALKGGQPG
AWWGLMGVCF AYGFFHAAGP GHGKLVIGGY GLGSAVTLWR LSALAVASSL AQAATAVLLV
LSGVWLFDWG RERLTATAED LLAPVSYALM ALLGLYLLLR GLRRGWRLRA AEAGPHAHAD
HHHVPAGTGG AQDHAPVALQ SVGTHHNHHH DHQHHDHDHH DHHDHGHNHH AHGPGEVCAS
CGHRHGPTLQ EAASLRSWRE AVAIILSIAA RPCTGAVFLL LLTWRLDVLG AGVAGTFAMG
LGTASVTLCV ALLAAGVRGG LLMRVLSAGG NRGAQMAAAL EIAAGALVLA LCLQLLLRSL
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