| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1725 |
|---|
| Symbol | |
|---|
| ID | 4075789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 1823237 |
|---|
| End bp | 1823800 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 638007039 |
|---|
| Product | DoxX |
|---|
| Protein accession | YP_613720 |
|---|
| Protein GI | 99081566 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCGT TGATTTCTCT CCATAACGCC GTGTTCAACC TGGTTGAGCG CTTGGGCGAC
TGGCTGATGC CGCTATTTGC CCGTTTCACT TTTGCCGCTG TGCTGCTGCT CTATTACTGG
AACTCCGGGC TCACCAAGCT GGGCGATGGC CTCTTTGGGC TGTTTTCGCC CTCGATCGGT
GCTTATAGCC AGATCTTTCC CAAACAACTC GAGGCCGTTG GCTACGATGT GTCCCAGTTC
GGACTGTTGC AGTGGGTTGT CGTGATGGCA GGCACTTACG CCGAATTCCT GCTGCCGCTT
CTGATCGTGA TTGGCCTGGC CACGCGGATC GCCTCGCTTG GCATGATCGG CTTTGTGGTG
GTGCAGTCGC TCACGGATGT CTACGGGCAT GGTGCAACGG ATACCAAAAC GCTGGGCGCC
TGGTTTGATC GCTTCTCCGA CAGTGTCATC ATGGACCAAC GTCTGCTGTG GGTCTTTGTG
CTCAGCTATC TGGTGGTGAA AGGCGCAGGT GCGCTCTCTG TGGATGCGGT GCTGCGCGCC
CGCCATCATC ACGCTCAGGA CTGA
|
|---|
| Protein sequence | MTALISLHNA VFNLVERLGD WLMPLFARFT FAAVLLLYYW NSGLTKLGDG LFGLFSPSIG
AYSQIFPKQL EAVGYDVSQF GLLQWVVVMA GTYAEFLLPL LIVIGLATRI ASLGMIGFVV
VQSLTDVYGH GATDTKTLGA WFDRFSDSVI MDQRLLWVFV LSYLVVKGAG ALSVDAVLRA
RHHHAQD
|
|---|
| |