Gene TM1040_1722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1722 
Symbol 
ID4075786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1821195 
End bp1821500 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content66% 
IMG OID638007036 
Producthypothetical protein 
Protein accessionYP_613717 
Protein GI99081563 
COG category[S] Function unknown 
COG ID[COG5572] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.685505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACCA CCACCAAAAC TCTCGCCGTT GCAGGCGCCG TTGCCGCAGC ACTGACAGCC 
GTCACCACGT CGCACGCCTC TGCTCAGGCC AAAGAGAAAT GCTATGGCGT TTCGCTGGCC
GGTCAGAACG ACTGCGCGGC CGGTCCCGGC ACCACCTGCG CGGGCACATC CACCGTTGAC
TATCAGGGCA ACGCCTGGAC GCTCGTCGAC TCTGGCACCT GCACCGAGAT GGAGCTGCCG
GCGATGGCAG ATGGCACCGC ACGCGCAGGC TCGCTCGAGC CGCTCGAGCG CGACCTGCCA
GCCTAA
 
Protein sequence
MSTTTKTLAV AGAVAAALTA VTTSHASAQA KEKCYGVSLA GQNDCAAGPG TTCAGTSTVD 
YQGNAWTLVD SGTCTEMELP AMADGTARAG SLEPLERDLP A