Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1722 |
Symbol | |
ID | 4075786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1821195 |
End bp | 1821500 |
Gene Length | 306 bp |
Protein Length | 101 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638007036 |
Product | hypothetical protein |
Protein accession | YP_613717 |
Protein GI | 99081563 |
COG category | [S] Function unknown |
COG ID | [COG5572] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.685505 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACCA CCACCAAAAC TCTCGCCGTT GCAGGCGCCG TTGCCGCAGC ACTGACAGCC GTCACCACGT CGCACGCCTC TGCTCAGGCC AAAGAGAAAT GCTATGGCGT TTCGCTGGCC GGTCAGAACG ACTGCGCGGC CGGTCCCGGC ACCACCTGCG CGGGCACATC CACCGTTGAC TATCAGGGCA ACGCCTGGAC GCTCGTCGAC TCTGGCACCT GCACCGAGAT GGAGCTGCCG GCGATGGCAG ATGGCACCGC ACGCGCAGGC TCGCTCGAGC CGCTCGAGCG CGACCTGCCA GCCTAA
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Protein sequence | MSTTTKTLAV AGAVAAALTA VTTSHASAQA KEKCYGVSLA GQNDCAAGPG TTCAGTSTVD YQGNAWTLVD SGTCTEMELP AMADGTARAG SLEPLERDLP A
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