| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1721 |
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| Symbol | thrS |
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| ID | 4075785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1819028 |
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| End bp | 1820974 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007035 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_613716 |
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| Protein GI | 99081562 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAGA TTTCCCTCAC ATTCCCCGAT GGCAACGCAC GTTCCTACGA CGCAGGGATT
ACCCCTGCCG AGGTCGCAGC CGACATCTCC ACTTCCCTTG CCAAAAAAGC GATCTCTGCC
ACCGTGGACG GTCAACACTG GGACCTGCAA TGGCCAGTGA CCCAGGATGC CGCCATCGCC
ATCCACACGA TGAAGGACGA GGCGCAGGCC AATGAGCTCA TCCGGCACGA CCTTGCGCAT
ATCATGGCGC GCGCGGTGCA GGAGATCTGG CCCGATACCA AGGTCACCAT TGGCCCGGTC
ATCGAAAATG GCTGGTATTA TGACTTTGAT CGTGCGGAAC CCTTCACCCC CGAAGATCTC
GGCACGATCG AAAAGAAGAT GAAAGAGATC ATCAACAAGC GCGAACCCGT GACCACAGAG
GTTTGGGAGC GCGAGAAGGC GATCCAGTAT TACACCGACA ACAACGAGCC CTATAAGGTC
GAGCTGATCG ACAGCATCCC CGGCGATGAG CCGCTGCGGA TGTATTGGCA TGGCGACTGG
CAGGATCTCT GCCGCGGGCC GCACCTGCAG CACACCGGCC AGGTGCCGGG CGATGCCTTC
AAGCTGATGT CGATCGCCGG CGCCTACTGG CGCGGCGACA GCGATCGCCA GATGCTCCAG
CGCATCTACG GCGTGGCCTT CACCGGCAAG GAAAAGCTCA AGGCGCATCT CACCATGCTC
GAGGAGGCCG CCAAGCGCGA CCACCGCAAG CTGGGCCGCG AGATGAACCT TTTCCACATG
CAGGAAGAAG CACCCGGCCA GGTGTTCTGG CATCCGAACG GATGGCGCAT CTACACCACG
CTTCAGGACT ACATGCGCCG CATGCAGGAT CGCGACGGCT ATGTAGAGGT CAACACGCCT
CAGGTGGTGG ACCGCAAACT CTGGGAAAAG TCCGGCCACT GGGACAAGTA TCAGGAAAAC
ATGTTCATTG TTGAGGTCGA CGAGGATCAC GCCCGCGAAA AGGCCGTGAA CGCCCTGAAG
CCGATGAACT GCCCCTGCCA CGTGCAGGTG TTCAACCAGG GGCTCAAGTC CTATCGCGAC
TTGCCTCTGC GCATGGCAGA GTTCGGCTCC TGCGCGCGCT ACGAACCCTC GGGCGCCCTG
CATGGCATCA TGCGCGTGCG CGGCTTCACG CAGGATGATG GCCACATCTT CTGCACCGAA
GATCAGATTA CATCCGAGAC CGCAAAGTTC ATCGCCTTCC TCTCCAAAGT CTATGCAGAT
CTCGGCTTTG ACAATTGGAC CATCAAGCTC TCCACCCGCC CCGAACAGCG GATCGGCTCG
GATGAGACAT GGGACAATAT GGAACAGGCC CTTGGCGATG CCTGCAAGGC CGCGGGCTAC
GACTATGAGA TCCTCGAAGG CGAAGGCGCC TTCTATGGTC CCAAACTCGA GTTCACCCTG
ACCGACGCCA TCGGCCGGAA CTGGCAATGC GGCACACTTC AGGTGGATGC CAACCTGCCC
GAACGGCTCG AAGCGAGCTT TATCGGTCAG GACGGCAGCA AGCACCGTCC GGTCATGCTG
CACCGCGCCA CCCTTGGCTC GTTCGAGCGC TTCATCGGCA TCCTGATCGA AGAGCACGCT
GGCAAGCTCC CGTTCTGGCT CGCGCCGCGT CAGGTGGTGG TCGCCTCGAT TACGTCAGAG
GCGGACGACT ATGTGAACGA AGTGGTCGAG ACCCTGCGCG CCGCCGGTGT GCGAGCCGAG
GCCGATACGC GCAATGAGAA GATCAACTAC AAGGTCCGCG AGCATTCGGT TGGCAAAGTG
CCGGTGATTC TCGCCGTTGG CCACCGCGAG GTTGAGGAGC GCACCGTCTC CGTGCGTCGT
CTTGGCGAGA AACAGACCAA GGTTGAGAGC CTCACAAATG TTACAGAGGA ACTGGCAAAG
GCCGCAACGC CGCCAGATCT TCTGTAA
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| Protein sequence | MAQISLTFPD GNARSYDAGI TPAEVAADIS TSLAKKAISA TVDGQHWDLQ WPVTQDAAIA
IHTMKDEAQA NELIRHDLAH IMARAVQEIW PDTKVTIGPV IENGWYYDFD RAEPFTPEDL
GTIEKKMKEI INKREPVTTE VWEREKAIQY YTDNNEPYKV ELIDSIPGDE PLRMYWHGDW
QDLCRGPHLQ HTGQVPGDAF KLMSIAGAYW RGDSDRQMLQ RIYGVAFTGK EKLKAHLTML
EEAAKRDHRK LGREMNLFHM QEEAPGQVFW HPNGWRIYTT LQDYMRRMQD RDGYVEVNTP
QVVDRKLWEK SGHWDKYQEN MFIVEVDEDH AREKAVNALK PMNCPCHVQV FNQGLKSYRD
LPLRMAEFGS CARYEPSGAL HGIMRVRGFT QDDGHIFCTE DQITSETAKF IAFLSKVYAD
LGFDNWTIKL STRPEQRIGS DETWDNMEQA LGDACKAAGY DYEILEGEGA FYGPKLEFTL
TDAIGRNWQC GTLQVDANLP ERLEASFIGQ DGSKHRPVML HRATLGSFER FIGILIEEHA
GKLPFWLAPR QVVVASITSE ADDYVNEVVE TLRAAGVRAE ADTRNEKINY KVREHSVGKV
PVILAVGHRE VEERTVSVRR LGEKQTKVES LTNVTEELAK AATPPDLL
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