| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1699 |
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| Symbol | |
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| ID | 4078275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1795432 |
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| End bp | 1796337 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007013 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_613694 |
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| Protein GI | 99081540 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.311486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.750741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATCG AGTTTCGTCA TCTTCGGACC ATCAAGGCGA TCCACGAGGC CGGTGGGCTG
GCGCGGGCGG CGGATCAGCT CAACATCACC CAGAGCGCGC TCAGTCATCA GATCAAGGGG
CTTGAAGAGC AGGCGGGGGT AGAGCTGTTT TTGCGCCGCT CAAAACCGAT GAAGCTCTCT
GCGGCGGGTC TGCGGCTGTT GCGGTTGGCA GAGCAGATCC TGCCGCAAGT TGAGTCTGCG
CAAGCAGAAT TTGCCGCCCT GCGCGAGGGC GAGGCGGGGC GTCTGCACAT CGCAATTGAA
TGCCACGCCT GTTTTGAATG GCTGTTTCCT GTCCTGGAGG GCTTTCGCAA AAGCTGGGGG
GATGTGGATG TGGACATCCG TCCGGGTCTC GCGTTCGAGG CCATGCCCGC TTTGATGCGC
GAAGAGGTGG ATCTGGTGGT GACCTCCGAC CCCGAGGACA TGCCGGGGGT CTCCTTTATT
GAACTCTTTG ATTACAATCC CGTGTTTGTC GCCTCTGCCC AGCACGCGCT TGCCGCAAAG
CCCTATGTAG AAGCCGAGGA TTTTCGTGGT CAGACCCTCA TTACCTATCC CGTAGAGCGC
ACCCGCCTCG ATGTGTTCAG CCAGCTCTTG ATCCCGGCGG GCGTGGAGCC TGCGAGCATC
AGGAAGGTCG AACTGACGGC GGTGATCTTG TTGTTGGTGG CCTCCAACCG CGGGGTCTCG
GTGTTGCCTG ACTGGGTTGT GCGCGAGGTG AAGTATTCCT CGGATTATGT GACGCGCCCG
CTGACAAAAC TGGGCATCAC CCGCCGGCTT TATGCAGCGA TCCGCAGCGA GGACGAAAGC
AAACCGTTCA TGCAGGAGCT GATCCGTCTG GCCCGGGTCG AGGCGCGCAA GTTGCAGCAG
GTCTAG
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| Protein sequence | MHIEFRHLRT IKAIHEAGGL ARAADQLNIT QSALSHQIKG LEEQAGVELF LRRSKPMKLS
AAGLRLLRLA EQILPQVESA QAEFAALREG EAGRLHIAIE CHACFEWLFP VLEGFRKSWG
DVDVDIRPGL AFEAMPALMR EEVDLVVTSD PEDMPGVSFI ELFDYNPVFV ASAQHALAAK
PYVEAEDFRG QTLITYPVER TRLDVFSQLL IPAGVEPASI RKVELTAVIL LLVASNRGVS
VLPDWVVREV KYSSDYVTRP LTKLGITRRL YAAIRSEDES KPFMQELIRL ARVEARKLQQ
V
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