| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1594 |
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| Symbol | |
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| ID | 4078403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1704640 |
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| End bp | 1705593 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638006907 |
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| Product | dihydrodipicolinate synthetase |
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| Protein accession | YP_613589 |
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| Protein GI | 99081435 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.299034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACA AAAAGAACGA AGCCAAGGCC TACGCCCGTG AAACCATGCG CGGCATTTGG
GCGGCGGCGC TAAATCCCTT TGATGAGGCG CTAAAACTCG ACGAGGCGGG GCTGCGGCGC
AATATCCGCC ATTGGATCGA CGATCTGGAC ATTCAAGGCC TGTTCATTGC TGGCAAGCAA
GGCGAGTTCT GGTCGATGTC CATCGAGGAG CGCAAGCGCA ACATGACCAT CGCAGTCGAG
GAATGCGGCG ACAAGGCGGG CACGATCATG TCGATCTCGG ACCAAAGCGT GGACACGGTG
CTCGACCTTG GTCGCCATGC TCAGAGCTGC GGGGCGGATT ATGTTGTGGT GCATGCCCCG
ATGCTGAGCT TTTGCCACGA CCGAGATGAG GTTTTGTATA ATTATTATAA ATACCTGTGC
GACCGTCTTG ATATCGGGAT CGCCATGTGG AGCCACCCGG ACAGCGGTTA TCTGATGGCA
CCGGAGACAT GTGCGCGCAT TGCCGAGCTG CCGAATATCA TGGCGATCAA ATACTCTGTT
CCGCGCGAGA TGTATGCCCG ACTGACGCAG ATGGTCGGGG ACAAGATCCT TGTGTCGACC
TCGGCAGAAG ACGATTGGCT CGACAATATC GAGGATCTGG GTTGGCAGCT CTATCTGTGT
TCCTCGCCGC CCTATCTTCT GCAGACCAAG GCCGACCGGC GCATGCATGA ATACACCGAA
CTGGCCTTTG CCGGAAAATT CGAAGCCGCC CGGAAGCTGC GCAACAGCCT GGAACCCGTG
CGCAATGCGT TGCGCGACAC CAAACCCGCT GGCAAGCCGA CCGCGCATGG CAAATACTGG
CAGGAACTCT TGGGACAGAC CGGGGGACGT GTGCGTCATC CGATGCTGGA GCTCACCGAG
GCCGAGAAAG CCGCCACCAG TGCCGCCTTT GAGGATTGTG GCCTCCTGCG TTGA
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| Protein sequence | MKYKKNEAKA YARETMRGIW AAALNPFDEA LKLDEAGLRR NIRHWIDDLD IQGLFIAGKQ
GEFWSMSIEE RKRNMTIAVE ECGDKAGTIM SISDQSVDTV LDLGRHAQSC GADYVVVHAP
MLSFCHDRDE VLYNYYKYLC DRLDIGIAMW SHPDSGYLMA PETCARIAEL PNIMAIKYSV
PREMYARLTQ MVGDKILVST SAEDDWLDNI EDLGWQLYLC SSPPYLLQTK ADRRMHEYTE
LAFAGKFEAA RKLRNSLEPV RNALRDTKPA GKPTAHGKYW QELLGQTGGR VRHPMLELTE
AEKAATSAAF EDCGLLR
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