| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1544 |
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| Symbol | |
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| ID | 4075842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1650329 |
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| End bp | 1652491 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638006857 |
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| Product | AIR synthase related protein-like |
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| Protein accession | YP_613539 |
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| Protein GI | 99081385 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0709] Selenophosphate synthase
[COG1252] NADH dehydrogenase, FAD-containing subunit |
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| TIGRFAM ID | [TIGR00476] selenium donor protein
[TIGR03169] pyridine nucleotide-disulfide oxidoreductase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.134169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0275884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCTC CCCGCCTTCC CCTGACCCGC GATCTGGTTC TTGTGGGAGG CGGACACACC
CATGCGCTTT TGCTCCGGAT GTGGGGCATG AAGCCGCTTC CCGGCGTGCG ACTAACGCTG
ATCAATCCCG GACCAACCGC GCCCTATTCA GGGATGCTGC CGGGGTTTGT CGCCGGTCAC
TACACGCGGG ATGCCCTCGA CATCGACCTG GTAAAGCTCG CGCGTTTTGC AGGCGCGCGG
CTGATCTTGG GAGCCGCTGA AGAAATCGAC CCGATCTCAA AGCGCATCAC CGTGCCGGGA
CGACCCGCGA TCGCCTATGA CGTGGCCTCC ATCGACATCG GCATAACATC GGCAATGCCA
GAACTGGTGG GTTTTGACGA TTTTGCCATT CCAGCCAAGC CCCTGGGCAG GTTTGCAACC
CGCTGGGATG CCTTTCGCAA TGGCTCCGAT CCGGCCCGCA TCGCCTGCAT CGGTGGCGGT
GTCGCTGGCG TAGAGCTGAT CCTCGCAATG GCCCATGCGC TGCGCCAGCA GCAGCGACTG
GCTCAGGCGA CCCTGATCGA TAGCGGATCT GTCCTTTCTG TGCTGACCTC GCAGAGCCAG
ACCCGCCTGC GCAAGGCGCT GGACGCCAAC GGGGTACGCA TCCTACAACA GACCCGGATC
GACCACCTGA GCGCGGGTCG CATTCATCTT GAAGGCGGCC GGGTGATCGA CAGCGATTTC
ACGGTTGGTG CAGCAGGCGC GCGCGCCTAC GGCTGGCTTG AGACCTCGGG CCTTCAGCAG
CATGAGGGGG CGCTGGTCAT CTCTGAAACG CTCCAGACGT CGGACCCGGA TGTATTTGCC
TGTGGCGATT GCGCTCATAT GGCCTATGCG CCCCGACCCA AGGCGGGCGT CTATGCCGTG
CGTCAGGCTC CCGTGCTCTA TCACAATCTC AAGGCGGTGC TTGGGGGCGG ATCGCTGAAG
TCTTATCAGC CGCAAAAGGA CTATCTGAAG CTCATTTCCA TGGGCGATAA ATCGGCGCTC
GCGGATCGTG ACGGGCGCAG CTTTGCCGGT GGCCTCCTGT GGCGGTGGAA GGATCACATC
GACCGCAAAT TTATGGGCAA GTTTTCCGCC CTGCCACAGA TGCCCGCCCC CGCCCTGCCC
CGCAGCCGCG CCAAAGGCAT GGAGGCGGTG CTTGGGAGCA AACCCATGTG TGGGGGCTGT
GGCTCGAAAG TCGGGCGGCA CGCGCTACAC GCGGGGCTTG GTGCTTTTTC CGGTGCGCAA
CGCGCTGATG TGACGCCCCT GCCGGGGGAT GACGCCGCAC AGCTCATGAC GGGCAGCGCG
ACACAGGTCA TCAGCACCGA TCACTTGCGG GCCTTTACCG AAGATCCGGT GGTGATGACT
GCGATCGCCG CGCAACACGC GCTCAATGAC ATCTGGGCGA TGGGAGCGCA TCCACAGGCC
GCAACCGTAA CCCTGATCCT GCCCCGCCAA TCAGCGGACT TGCAGGAACG TCTGCTCGCC
GAGATCATGC ATAGCGCCCA TCAGGAAATG ACAGCCGCCG GCGCGGCCAT CGTGGGCGGT
CATACCTCTT TGGGTGAAGA ACTCACCATT GGTTTTACCC TGACCGGCCT ATGCGAGACG
CCCCCGTTGA CGCTTGCGGG GGCGCAGGCG GGGGATCACC TGATCCTCAC CAAACCGATT
GGCTCCGGCA CGCTGATGGC AGCAGAGATG TCGGGCACAG CGCCGGGCGC CTGTGTGGCA
GAGGCGCTTG ATCTGATGTG CCAGAGCCAG CGCGACGCCG CCACTGTTTT GCGCCCGGTG
GCCCATGCGA TGACGGATGT CACCGGCTTT GGCCTCTTGG GGCATTTGCA GGGCCTCTGT
GCGGCCTCCG ACCTCGGAGC CGAAGTTGAC TTTGATGCCA TCCCGCTGAT GGCGGGCGCT
GCGGCGCTTG CGGAGGCAGG TGTGCGCTCT ACCATCTTCG AGGACAACGC GGCTCTTCTG
CCAGGGATCG GCACAGCCGG TGCGCGCGCG CTGCTCTTTG ACCCGCAGAC CTCGGGCGGG
CTATTGGCCT CGGTTGATCC AGCGCGCGCA TCCGACGCCC TTCGTGAGTT GAAAAACCAT
GGCTATCACG CTGCAAAGAT TGGAGAAATA CGTGATGCAG ACCAAGGTAT CGTGATCCGT
TAG
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| Protein sequence | MHAPRLPLTR DLVLVGGGHT HALLLRMWGM KPLPGVRLTL INPGPTAPYS GMLPGFVAGH
YTRDALDIDL VKLARFAGAR LILGAAEEID PISKRITVPG RPAIAYDVAS IDIGITSAMP
ELVGFDDFAI PAKPLGRFAT RWDAFRNGSD PARIACIGGG VAGVELILAM AHALRQQQRL
AQATLIDSGS VLSVLTSQSQ TRLRKALDAN GVRILQQTRI DHLSAGRIHL EGGRVIDSDF
TVGAAGARAY GWLETSGLQQ HEGALVISET LQTSDPDVFA CGDCAHMAYA PRPKAGVYAV
RQAPVLYHNL KAVLGGGSLK SYQPQKDYLK LISMGDKSAL ADRDGRSFAG GLLWRWKDHI
DRKFMGKFSA LPQMPAPALP RSRAKGMEAV LGSKPMCGGC GSKVGRHALH AGLGAFSGAQ
RADVTPLPGD DAAQLMTGSA TQVISTDHLR AFTEDPVVMT AIAAQHALND IWAMGAHPQA
ATVTLILPRQ SADLQERLLA EIMHSAHQEM TAAGAAIVGG HTSLGEELTI GFTLTGLCET
PPLTLAGAQA GDHLILTKPI GSGTLMAAEM SGTAPGACVA EALDLMCQSQ RDAATVLRPV
AHAMTDVTGF GLLGHLQGLC AASDLGAEVD FDAIPLMAGA AALAEAGVRS TIFEDNAALL
PGIGTAGARA LLFDPQTSGG LLASVDPARA SDALRELKNH GYHAAKIGEI RDADQGIVIR
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