Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1542 |
Symbol | |
ID | 4075840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1649633 |
End bp | 1649902 |
Gene Length | 270 bp |
Protein Length | 89 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638006855 |
Product | putative monovalent cation/H+ antiporter subunit F |
Protein accession | YP_613537 |
Protein GI | 99081383 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2212] Multisubunit Na+/H+ antiporter, MnhF subunit |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0184419 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAAT ATGCCTATAT CTTCGCCTTC GGCTGTTTCG CCCTGGCGAT GCTGATGAAC CTCTGGAAAG TCGTGACAGG CACAGAGGTG ACCGACCGGA TCCTCGCGCT TGATACCATG TTCATCAACT CCATCGCCCT TGTGGTTCTC TTTGGGGTGT TCCTCAGTTC CGAGATCTTC TTTGAGGCCT CGCTGATCAT GGCGATGCTC GGGTTCATCT CTACCGTGGC CTATGCGCGC TTCTTGCTGC GCGGCAACAT CATCGAGTGA
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Protein sequence | MIEYAYIFAF GCFALAMLMN LWKVVTGTEV TDRILALDTM FINSIALVVL FGVFLSSEIF FEASLIMAML GFISTVAYAR FLLRGNIIE
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