| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1538 |
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| Symbol | |
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| ID | 4075836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1644301 |
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| End bp | 1647162 |
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| Gene Length | 2862 bp |
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| Protein Length | 953 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006851 |
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| Product | putative monovalent cation/H+ antiporter subunit A |
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| Protein accession | YP_613533 |
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| Protein GI | 99081379 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
[COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0170317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCCTTT TCCTAATAGC AGCCCTGCCG TTTCTCGGCG CGCTGTTTCC CGCGCTTCTG
ATCCGCGCCG GTCGCAATGC CTCGGCCTCA TCTGCCGGGC TGGCGACGGG ACTTGCCTTT
ATTGGATTGA TGCTACACGC CCCCGCCGTG ATGCGCGGCG AGGTGATCCA TGTGGGCGTC
GACTGGCTGC CCGCGCTTGG GCTATCAGCC AATTTCTTTC TGGATGGGCT TGGGTTTCTC
TTTGCTACCC TGATCCTCGG GATCGGCCTG TTGATCATTG TCTATGCGCG GTTTTACCTC
TCGCGGCAGG ATCCGATGGG GCAGTTCTAC ACCTACCTGC TGCTGTTCCA GGGCGCGATG
GTGGGGATTG TTCTGTCCGA CAACATCCTG CTTTTGCTGA TTTTCTGGGA ACTTACGTCA
CTTTCCTCAT TCCTGCTGAT CGGCTATTGG AAACATCTGC CCGAAGGCCG TCAGGGTGCG
CGGATGGCAT TGACCGTCAC CGGCATGGGT GGGCTGGCCA TGATTGGTGG CATGCTGATC
CTCGGGCATA TTGCCGGATC TTATGACATC AGCGTTATCT TGCAAAACAA GGACGCGATC
CAATCCTCGG ATCTCTATCT GCCGGCGCTG ATCCTGATCC TCATCGGTGC CTTTACAAAA
TCGGCGCAGT TCCCGTTCCA TTTCTGGCTG CCACATGCGA TGGCCGCGCC GACGCCGGTT
TCGGCCTATC TGCACTCGGC CACCATGGTC AAAGCGGGGC TTTTCCTGAT GGCGCGTCTG
TGGCCGGTGC TTTCGGGCAC GCCGGAGTGG TTCTATATCG TTGCCACCAC AGGCCTGATC
ACCATGGTGC TGGGTGCCGT GATTGCGCTC TTCAAGGATG ACCTGAAGGC GCTCCTGGCG
TTTTCGACAG TCTCGCATCT GGGCCTGATC ACCATGCTTT TGGGTTTTGG CACCAAATAC
GCAGCCGTGG CGGCGGTGTT TCACATCATC AACCACGCGA CCTTCAAGGC GGCGCTCTTT
ATGTCGGCGG GGATCGTCGA TCACGAGGCC CACACACGCG ACATCAAACG CCTCGGCGGG
TTGCGACACC TGATGCCGGT GACCTTTGTG ATCGCGACAA TCGCTTCGCT CTCGATGGCG
GGTATTCCGC CGCTCAACGG GTTCCTCTCG AAGGAAATGA TGCTGGATGC GGCAGAAAAG
ACCTCCTGGC TCTCGTCGCC CTATATGATT GCAGGGCTTG CCACCTTTGC GGCGATGTTC
TCGGCGGCGT ATTCCTTCCG CTACATCGCG CATGTTTTCC TTGGCCCCAA GCGCGAGGAC
TACCCTGCAA AACCGCATGA TCCGGGCTTT GGCATGTATG CCTCCCCCGC GCTTCTGGTG
GTGCTGGTGG TGCTGATCGG CCTGTTCTCG GCCAAGCTCG TCGGGCCGCT GGTGGCGGCG
TCGGCCAGTG CGGTCATCGG TGGCGAGAAA CTGCCCTATT ATTCGCTGAA GCTCTGGCAT
GGGTTCACAC CTGCGCTTTA TATGTCGGTG GTCGCTGTGC TCGGTGGTCT GGTGCTTCTG
TCACTGCATC GCCCGCTCGA ACGCGTATGG AATGCGCTCC CGCGCCCCGA GGCCAAGGTG
ATCTTTGATG CGATCGTAAG CGCGCTGACC GGGCTCGTGC AGGGGCTGAC CGGGCGGCTG
CATGATGGAT CGCTCACGCG GTATGCCGCG ATCATGCTGA GCTTCACCGT CGCGATCAGC
CTTTATGCCT ATGTTACCGG GACGATGGGC CTGCCGACGC GGCCGATGCA AGAGGCGGGC
GTGATGCCCA TGGTGGCCTG GTTCTGCCTT GCGATGGCTG CGCTCTGTAT CGTTGTGTTC
CACCGCCAGC GCTTTGTCGC GCTGATCCTG ATCGGCATTG TCGGCCTGAT CGTGTCGATG
TCCTTCAACT ATCTCTCCGC GCCGGACCTT GCGCTGACGC AGATCTCGGT CGAGGTGGTC
ACCATCATTC TGATGCTGCT GGCGCTGAAT TTCCTACCCA AGGAAACCCC GGTAGAAACA
CCGCTGTTCA CCCGCATGCG CGATGGCGCC ATCGCCATCA TTGGCGGTCT GGGCGTCGGT
GGGCTGATCT ATGCAATGCT GGTGCGGGAT TTCGCGTTCC CGGCGATCTC CGGCTTTCAC
ATCGAGAACT CCTACAAAGG CGGTGGCGGC ACCAATATGG TGAACGTGAT CCTTGTGGAC
TTCCGCGGCT TTGACACTTT TGGCGAAATC ATCGTGCTGG GCATCGCCGC TCTGGTGATC
TTTGCCCTCA CCGAAGCGGT CCTGTCGACA CGCGTGCGCG CCTACCTCCT TAATCGCAAA
CCCGATCTGG AGCAGGCAGG CGACAGCCAT CCCGGCATGA TGGTGGTGGT CACACGGATG
ATGATGCCGG TGGCCCTGAT GGTCGCGGCC TATATCTTCT TCCGAGGGCA TAACCTGCCG
GGCGGTGGCT TTATCGCCGG TCTGGTCGCG GCGATTGCGG TGATCATGCA GTACATGGCA
TCTGGCTTTG GCTGGGCGAC CGAACGCCAG CGCTACCCCT ATCACGGGAT CATCGGCTCG
GGCGTGCTGA TCGCTGCAGC CACGGGTCTT GGGGCCTGGT TCAACGACCA GCCCTTCCTG
ACGTCCGCCT TTGGGTATGT TCACATCGAA CCGCTCAATG AGTTCGAGGT GGCCACGGCG
GCGCTCTTTG ATCTGGGCGT GTTCTTGGCG GTGGTCGGCG CGGTGATGCT GGCTCTTGAA
AGCCTTGCGC GCTTTGCCTG GCAGCCCGGC ACCGACTCTG AGCATGCCAT TGAAATCAAC
CCTGCCCGCG ATGCTGCGGC GCAAGACATG AAGGAGGTCT AA
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| Protein sequence | MSLFLIAALP FLGALFPALL IRAGRNASAS SAGLATGLAF IGLMLHAPAV MRGEVIHVGV
DWLPALGLSA NFFLDGLGFL FATLILGIGL LIIVYARFYL SRQDPMGQFY TYLLLFQGAM
VGIVLSDNIL LLLIFWELTS LSSFLLIGYW KHLPEGRQGA RMALTVTGMG GLAMIGGMLI
LGHIAGSYDI SVILQNKDAI QSSDLYLPAL ILILIGAFTK SAQFPFHFWL PHAMAAPTPV
SAYLHSATMV KAGLFLMARL WPVLSGTPEW FYIVATTGLI TMVLGAVIAL FKDDLKALLA
FSTVSHLGLI TMLLGFGTKY AAVAAVFHII NHATFKAALF MSAGIVDHEA HTRDIKRLGG
LRHLMPVTFV IATIASLSMA GIPPLNGFLS KEMMLDAAEK TSWLSSPYMI AGLATFAAMF
SAAYSFRYIA HVFLGPKRED YPAKPHDPGF GMYASPALLV VLVVLIGLFS AKLVGPLVAA
SASAVIGGEK LPYYSLKLWH GFTPALYMSV VAVLGGLVLL SLHRPLERVW NALPRPEAKV
IFDAIVSALT GLVQGLTGRL HDGSLTRYAA IMLSFTVAIS LYAYVTGTMG LPTRPMQEAG
VMPMVAWFCL AMAALCIVVF HRQRFVALIL IGIVGLIVSM SFNYLSAPDL ALTQISVEVV
TIILMLLALN FLPKETPVET PLFTRMRDGA IAIIGGLGVG GLIYAMLVRD FAFPAISGFH
IENSYKGGGG TNMVNVILVD FRGFDTFGEI IVLGIAALVI FALTEAVLST RVRAYLLNRK
PDLEQAGDSH PGMMVVVTRM MMPVALMVAA YIFFRGHNLP GGGFIAGLVA AIAVIMQYMA
SGFGWATERQ RYPYHGIIGS GVLIAAATGL GAWFNDQPFL TSAFGYVHIE PLNEFEVATA
ALFDLGVFLA VVGAVMLALE SLARFAWQPG TDSEHAIEIN PARDAAAQDM KEV
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