| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1536 |
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| Symbol | |
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| ID | 4075834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1642659 |
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| End bp | 1643489 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006849 |
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| Product | putative polyhydroxybutyrate depolymerase |
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| Protein accession | YP_613531 |
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| Protein GI | 99081377 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.26582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.221996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCGC TACTGGCCAC GATTGCCACC CTCACGCTTG TCGAAGGTGC CGCCGCCTGT
GATACGCCAG AGACCGCCTG CAGACTGGAC ACTGGCAGCT ACCAGATCGT GCTCCCTGAC
ACGCCCGCAG ACCAGACGCC AGCCATTGTC TTCCTGCATG GCCATGGCGG ATCTGCGAAA
AATGTCATGA ATCTGGAGCA GATGGTCACA GGGTTTACAG CGCGCGGTTA CGCCGTAATC
GCCCCAAATG GCGCCCGCGG CGCGCAAGGC GTGCGAAGCT GGTCATTCCT GCCCGAGTTT
GGCGGGCGGG ATGATTTCAC CTTCTTGCAA GACGTTCTGA AGGACGCGGT AAAACGCTTT
GATGTTGATC CTGAACACTC TGTTTTGGCG GGGTTTTCCT CCGGCGCTTT CATGGTGAAC
TATCTCGCCT GTCGCGACCC GGATGCTTTT GCGGCTTATC TGCCGGTTGC AGGCGGCTTC
TGGAGACCTC AACCAAAGGA ATGCGAGGGC CCTTTGCGGC TTTACCACAG CCACGGCTGG
GCGGATCGCG TGGTTCCGCT CGAAGGGCGC ATCCTGGGCG GCGGGCGTTT TGTGCAAGGT
GACATCTGGG CGGGTCTGGA GCTCTGGCGC GACACGCTGG GATGCGAGAC CCATGCCCCT
GCTGAAATCT GGCAGGACGG AGATCTGTCG ATGCGCAGCT GGTCTTGCGG CGATGGGGCG
GCCCTCACGT TTGAGCTCTT TCCCGGCGGG CATAGGGTTC CTTCGGGCTG GGCCGGCCGT
GTCGTCGACT GGCTTGAGGC CGACCCAACA GATGCACAGA CCGGTGGCTG A
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| Protein sequence | MIPLLATIAT LTLVEGAAAC DTPETACRLD TGSYQIVLPD TPADQTPAIV FLHGHGGSAK
NVMNLEQMVT GFTARGYAVI APNGARGAQG VRSWSFLPEF GGRDDFTFLQ DVLKDAVKRF
DVDPEHSVLA GFSSGAFMVN YLACRDPDAF AAYLPVAGGF WRPQPKECEG PLRLYHSHGW
ADRVVPLEGR ILGGGRFVQG DIWAGLELWR DTLGCETHAP AEIWQDGDLS MRSWSCGDGA
ALTFELFPGG HRVPSGWAGR VVDWLEADPT DAQTGG
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