Gene TM1040_1529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1529 
Symbol 
ID4075827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1632820 
End bp1633362 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content64% 
IMG OID638006842 
Producthypothetical protein 
Protein accessionYP_613524 
Protein GI99081370 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.601825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCGCC CTCTTGATCC CCTCCGCCGT CTGAGCACGG GGCTCGTGTT CAGCCTTGCT 
CTGTCGGCCG CACAGACCGC GGCGCTGACG GCGGCTCTGG CCGCATCTTT TGCAACGCCC
GCGACGGCAG ACCTTGCCGC GCGCGAGGGC TGGGCGATCC ATGCCAGCAC AAAGGACTAC
AAACGCCTTC TCGCCGACCT CAAAGCTGCC GTAAGAGCAC ACAATATGGG TGTCGTCACA
GAAGCCGGCC CCACCGGCGC CGCCGCTGCC CGCGGCATCA CCATTCCGGG AAACCGCGTT
GTTGGCGTCT TTGCAAACAC CTACGCAGTG GAGATCCTTG CGCTCTCCAC CGCCGCCATG
ATCGAAGCAC CGATCCGCTT CTATATTACG GAAAACCCCG ATGGCAGCGC GACGCTCTCC
TACAAGACCC CGAGCCATGT TTTTGCGCCC TATGTGCCCG AAGCAGGCGC CGCACTGACG
GCCGTCGCGG CGCGGCTCGA CGACGTCTTT GCCCAGATTG CTGCCGCAGC GCTGCAGAAT
TAA
 
Protein sequence
MVRPLDPLRR LSTGLVFSLA LSAAQTAALT AALAASFATP ATADLAAREG WAIHASTKDY 
KRLLADLKAA VRAHNMGVVT EAGPTGAAAA RGITIPGNRV VGVFANTYAV EILALSTAAM
IEAPIRFYIT ENPDGSATLS YKTPSHVFAP YVPEAGAALT AVAARLDDVF AQIAAAALQN