Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1529 |
Symbol | |
ID | 4075827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1632820 |
End bp | 1633362 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638006842 |
Product | hypothetical protein |
Protein accession | YP_613524 |
Protein GI | 99081370 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.601825 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCGCC CTCTTGATCC CCTCCGCCGT CTGAGCACGG GGCTCGTGTT CAGCCTTGCT CTGTCGGCCG CACAGACCGC GGCGCTGACG GCGGCTCTGG CCGCATCTTT TGCAACGCCC GCGACGGCAG ACCTTGCCGC GCGCGAGGGC TGGGCGATCC ATGCCAGCAC AAAGGACTAC AAACGCCTTC TCGCCGACCT CAAAGCTGCC GTAAGAGCAC ACAATATGGG TGTCGTCACA GAAGCCGGCC CCACCGGCGC CGCCGCTGCC CGCGGCATCA CCATTCCGGG AAACCGCGTT GTTGGCGTCT TTGCAAACAC CTACGCAGTG GAGATCCTTG CGCTCTCCAC CGCCGCCATG ATCGAAGCAC CGATCCGCTT CTATATTACG GAAAACCCCG ATGGCAGCGC GACGCTCTCC TACAAGACCC CGAGCCATGT TTTTGCGCCC TATGTGCCCG AAGCAGGCGC CGCACTGACG GCCGTCGCGG CGCGGCTCGA CGACGTCTTT GCCCAGATTG CTGCCGCAGC GCTGCAGAAT TAA
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Protein sequence | MVRPLDPLRR LSTGLVFSLA LSAAQTAALT AALAASFATP ATADLAAREG WAIHASTKDY KRLLADLKAA VRAHNMGVVT EAGPTGAAAA RGITIPGNRV VGVFANTYAV EILALSTAAM IEAPIRFYIT ENPDGSATLS YKTPSHVFAP YVPEAGAALT AVAARLDDVF AQIAAAALQN
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