Gene TM1040_1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1523 
Symbol 
ID4077079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1627653 
End bp1628045 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content55% 
IMG OID638006836 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_613518 
Protein GI99081364 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.216178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.435654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCAGA CTTCGCAAAC GGTGACCATC CGCCCCGCCA TTCCCGTGGT TCGAATTTTT 
GATCTGCAGA AGGCGCGCGA CTACTATATT GATTATTTGG GGTTTTCTCT GGATTGGGAG
TATCAGCACG AAGAGGATCT TCCGATCTAT ATGCAGATCT CGCGGTCAGG CTGCATCCTG
CACCTGAGCG AACATCACGG GGATGCCACG CCGGGCTCTA CCTGTTTTGT CCCCATCGAC
AATGCCATGG CGCTTCATGC GGAACTGGGT GAAAAACGCT ATCGCAACAT CAAACCGGCG
CTTGATGCGA TGCCGTGGGG GCTGCAGATC ACGGTGACAG ATCCCTTTGG CAACCGTTTA
CGCTTCTGTG AGCAGCGCTC TCGTGGCAGC TAA
 
Protein sequence
MEQTSQTVTI RPAIPVVRIF DLQKARDYYI DYLGFSLDWE YQHEEDLPIY MQISRSGCIL 
HLSEHHGDAT PGSTCFVPID NAMALHAELG EKRYRNIKPA LDAMPWGLQI TVTDPFGNRL
RFCEQRSRGS