| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1516 |
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| Symbol | |
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| ID | 4077072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1622952 |
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| End bp | 1623500 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006829 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_613511 |
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| Protein GI | 99081357 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0300196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.667528 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGATC CCGCAACTGA TCCCGCTTTT GACTATGCGC CTGTTGGACT TGCGCTTTTG
GAACATCGCA TCATCAAGCG GTGCAATCTG CTCTTTGCCG AGATCTTTGA CGCCCCCCCA
GAGGCGCTTT GCGAGACACC AATTGCTGCG CTTTATCCCA GCGCCGAGGA TTACCAGCGC
ATAGGCGAGA TCTTGCAGTT GCCGGAATCA CAAAGCGGAA TCTACCACGA CGAACGCATT
ATGCGTCGCA CGTCGGGCGC GCTGTTCTGG TGCCGGGTGC GCGGGCGATC CCTCGACGGT
GCGCGCCCGT TTCAGGCCGG TGTATGGTCC TTTGCCGATC TCTCCGAGGA GCGCCCCGTT
GTCAGCCTGA CCCCACGCGA ACGCGAAGTC GCGATCCTCA CCTGTCGGGG GCTCTCGGCC
AAGGAAATTG GCCTCAAACT GGATCTCTCC TATCGTACGG TAGAGACTCA CCGGGCGCGC
CTCTTGGTGA AATTCAACGC CAAAAAGCTG CCCGAACTGG TCGCAAAACT CAGTGGCATG
CCTCTTTGA
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| Protein sequence | MSDPATDPAF DYAPVGLALL EHRIIKRCNL LFAEIFDAPP EALCETPIAA LYPSAEDYQR
IGEILQLPES QSGIYHDERI MRRTSGALFW CRVRGRSLDG ARPFQAGVWS FADLSEERPV
VSLTPREREV AILTCRGLSA KEIGLKLDLS YRTVETHRAR LLVKFNAKKL PELVAKLSGM
PL
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