| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1515 |
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| Symbol | |
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| ID | 4077071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1621985 |
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| End bp | 1622740 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006828 |
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| Product | ABC transporter related |
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| Protein accession | YP_613510 |
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| Protein GI | 99081356 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.274382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.678489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTAA AACCGGATTT CTCCAAGAGC GCCAACCACG CGGCCACCGC CCCTGCCTTT
CTGTCGGTTT GGGATGTGCA TGCCTATTAC GGCGAAAGCT ACATCGTGCA GGGCATCAAC
TTTAATGTGC ATGAGGGCGA AATCCTCGCG CTTTTGGGCC GCAATGGCGC GGGCAAGACC
TCGACCCTGC GCTCCATCGC GCGCATCGGC TCTCCGATGG TAACACGGGG CGAGATCTGG
CTCGATCACC AGCCGCTGCA CCTGATGGAA AGCCACGAGG CCGCCACTGC CGGTTTGGGT
CTGGTGCCCG AAGATCGCCG CATCATTCCC GGTCTTACGG TCGAGGAAAA CCTGCAGCTG
GCACAGATTG CCCCACCAAT CGGCTGGTCG ATCGAGCGCC TCTACGAGCT CTTCCCGCGT
CTGGGCGAGC GGCGCAAGCA GGAGGGCGTG ACACTCTCGG GCGGCGAACA GCAAATGCTT
GCGATTGCGC GCGCCCTGGC CCGCGACATC AAGGTGCTGT TGCTCGACGA ACCCTACGAG
GGTCTGGCCC CGGTGATCGT GGACGAGATC GAAAAAACCC TCATCCACAT CAAGGAACAG
GGGATGACCA CCATCCTCGT AGAGCAAAAC ACGGTGCGGG CACTGCAACT GGCTGATCGG
GCGGTGATCC TCGACACAGG CGGGATCGTT TTTGACGGCG CCGCGGCAGA GGTTCTCGAA
AACGAAGAAC TGCGTTCTGA ATACCTCGCG ATCTGA
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| Protein sequence | MNVKPDFSKS ANHAATAPAF LSVWDVHAYY GESYIVQGIN FNVHEGEILA LLGRNGAGKT
STLRSIARIG SPMVTRGEIW LDHQPLHLME SHEAATAGLG LVPEDRRIIP GLTVEENLQL
AQIAPPIGWS IERLYELFPR LGERRKQEGV TLSGGEQQML AIARALARDI KVLLLDEPYE
GLAPVIVDEI EKTLIHIKEQ GMTTILVEQN TVRALQLADR AVILDTGGIV FDGAAAEVLE
NEELRSEYLA I
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