| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1374 |
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| Symbol | |
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| ID | 4075867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1466516 |
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| End bp | 1468060 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006684 |
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| Product | trimethylamine methyltransferase |
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| Protein accession | YP_613369 |
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| Protein GI | 99081215 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG5598] Trimethylamine:corrinoid methyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.181279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.561281 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGATG CAGCACCGCG TCGTCGAAGC CGGGGTGGCG GTGGCGCCGC CCGTCGTGCC
GAACGCACCA GCGTCAAGAT CGAGACAGCG AAGTATATCG AGCGCAATAT CCCGAACTAC
GAGGTGCTGA CAGAAGAGGC GCTCGAGGTC ATCGAGACAA ACGCCGAGAC CATCCTCGAG
GAGGTTGGCG TCAATTTCGT GGATAACCCG GCCGCGCTTG AACGCTGGCG CGACGCGGGC
GCCGATGTTC AGGGCGAGCG GGTCCGGATC CCGCGTGGTC TGGCGCGCAA ACTCTGCGAA
ACTGCGCCGA GCCAGTTTAC CCAGCACGCG CGCAACCCCG AGAAATCCGT TGAGATCGGC
GGCAAGAACC TCGTGCTCGC GCCGATCTAC GGCCCGCCGT TTGTGCGCGA TGCCAATGGT
GGCCGGCGCT ACGCAACGCT GGAGGATTTC CAGAAGTTCG TGAAGCTCGG CTATATGTCG
AAATGGCTGC ATCACTCTGG CGGGACCGTC TGCGAGCCCA CCGATGTTCC GGTGAACAAA
CGCCACCTCG ACATGTTGAT GGCGCATATC GAGCTCTCGG ATAAACCCTT CATGGGGTCG
GTTACGGAAC CGAGCCGTGC GCAGGACACC GTTGATATGT GCGGCATCCT GTTCGGCAAG
GATTTCGTGC AGGAAAATAC TGTCACCACC TCGCTGATCA ACATCAACTC GCCAATGACG
TTTGACGATG TGATGATGGG CGCGCTTGAG GTTTATGCCA AGAACAACCA GGCCTGCATC
ATTTCGCCCT TCATCGTGGG CGGTGCAATG GCTCCGGTCA CCATCGCGGG CACATTGACA
CAGGTCCTGG CAGAAGTTCT GGCCGGTGTG GCCTATAGCC AGCTGATCCG TCCCGGTGCG
CCGGTGATCT TCGGGGCCTT TGTGTCGTCG ATCGATATGA ACTCCGGTGC GCCGACCTTT
GGCACGCCCG AAGCCTCGAT GGTGACCTAT GGCGCCGGGC AGCTGGCGCG GCGCCTCAAT
CTGCCCTTCC GCTCGGCGGG GTCGTTCTGC GGCTCCAAAC TCCCCGATGC GCAGGCGGCC
TATGAGACGG CGAACTCGCT CAACATGGGG CTCTTGTCCG GCGTGAACTT CATGCTGCAT
TCTTGCGGCT GGCTCGAAGG CGGTCTGGTG GCCGATTTTG AGAAATTCGT GATGGACGCC
GATCAGCTCG GCGTGCTGCA TGGACTGGCC AAAGGCATCC AGATGGATGA AAACGGGCAG
GGCCTTGATG CGATCCGTGA GGTTGGCCCG GGAGGTCACT ACCTAGGATG TGCCCATACG
CAAGCGAACT TCAAAACGGC GTTCTGGAAG TCCAACCTCC TGGATTACAA GCCTTTTGAG
CAGTGGGAAG AAGAAGGCGC GCGCGACACC TACAAACTTG CCTCGGCGCG TGTGGAACAT
CTGCTCGCCA CCTACAAACA GCCCGAACTG GATCCCGCGA TCCGTGAGGC GCTGATGGCT
TACATCGCAG AAAAGAAAGC CTCGATGCCC GACGCCTTTA TGTAA
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| Protein sequence | MTDAAPRRRS RGGGGAARRA ERTSVKIETA KYIERNIPNY EVLTEEALEV IETNAETILE
EVGVNFVDNP AALERWRDAG ADVQGERVRI PRGLARKLCE TAPSQFTQHA RNPEKSVEIG
GKNLVLAPIY GPPFVRDANG GRRYATLEDF QKFVKLGYMS KWLHHSGGTV CEPTDVPVNK
RHLDMLMAHI ELSDKPFMGS VTEPSRAQDT VDMCGILFGK DFVQENTVTT SLININSPMT
FDDVMMGALE VYAKNNQACI ISPFIVGGAM APVTIAGTLT QVLAEVLAGV AYSQLIRPGA
PVIFGAFVSS IDMNSGAPTF GTPEASMVTY GAGQLARRLN LPFRSAGSFC GSKLPDAQAA
YETANSLNMG LLSGVNFMLH SCGWLEGGLV ADFEKFVMDA DQLGVLHGLA KGIQMDENGQ
GLDAIREVGP GGHYLGCAHT QANFKTAFWK SNLLDYKPFE QWEEEGARDT YKLASARVEH
LLATYKQPEL DPAIREALMA YIAEKKASMP DAFM
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