Gene TM1040_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1374 
Symbol 
ID4075867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1466516 
End bp1468060 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content60% 
IMG OID638006684 
Producttrimethylamine methyltransferase 
Protein accessionYP_613369 
Protein GI99081215 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG5598] Trimethylamine:corrinoid methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.181279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.561281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATG CAGCACCGCG TCGTCGAAGC CGGGGTGGCG GTGGCGCCGC CCGTCGTGCC 
GAACGCACCA GCGTCAAGAT CGAGACAGCG AAGTATATCG AGCGCAATAT CCCGAACTAC
GAGGTGCTGA CAGAAGAGGC GCTCGAGGTC ATCGAGACAA ACGCCGAGAC CATCCTCGAG
GAGGTTGGCG TCAATTTCGT GGATAACCCG GCCGCGCTTG AACGCTGGCG CGACGCGGGC
GCCGATGTTC AGGGCGAGCG GGTCCGGATC CCGCGTGGTC TGGCGCGCAA ACTCTGCGAA
ACTGCGCCGA GCCAGTTTAC CCAGCACGCG CGCAACCCCG AGAAATCCGT TGAGATCGGC
GGCAAGAACC TCGTGCTCGC GCCGATCTAC GGCCCGCCGT TTGTGCGCGA TGCCAATGGT
GGCCGGCGCT ACGCAACGCT GGAGGATTTC CAGAAGTTCG TGAAGCTCGG CTATATGTCG
AAATGGCTGC ATCACTCTGG CGGGACCGTC TGCGAGCCCA CCGATGTTCC GGTGAACAAA
CGCCACCTCG ACATGTTGAT GGCGCATATC GAGCTCTCGG ATAAACCCTT CATGGGGTCG
GTTACGGAAC CGAGCCGTGC GCAGGACACC GTTGATATGT GCGGCATCCT GTTCGGCAAG
GATTTCGTGC AGGAAAATAC TGTCACCACC TCGCTGATCA ACATCAACTC GCCAATGACG
TTTGACGATG TGATGATGGG CGCGCTTGAG GTTTATGCCA AGAACAACCA GGCCTGCATC
ATTTCGCCCT TCATCGTGGG CGGTGCAATG GCTCCGGTCA CCATCGCGGG CACATTGACA
CAGGTCCTGG CAGAAGTTCT GGCCGGTGTG GCCTATAGCC AGCTGATCCG TCCCGGTGCG
CCGGTGATCT TCGGGGCCTT TGTGTCGTCG ATCGATATGA ACTCCGGTGC GCCGACCTTT
GGCACGCCCG AAGCCTCGAT GGTGACCTAT GGCGCCGGGC AGCTGGCGCG GCGCCTCAAT
CTGCCCTTCC GCTCGGCGGG GTCGTTCTGC GGCTCCAAAC TCCCCGATGC GCAGGCGGCC
TATGAGACGG CGAACTCGCT CAACATGGGG CTCTTGTCCG GCGTGAACTT CATGCTGCAT
TCTTGCGGCT GGCTCGAAGG CGGTCTGGTG GCCGATTTTG AGAAATTCGT GATGGACGCC
GATCAGCTCG GCGTGCTGCA TGGACTGGCC AAAGGCATCC AGATGGATGA AAACGGGCAG
GGCCTTGATG CGATCCGTGA GGTTGGCCCG GGAGGTCACT ACCTAGGATG TGCCCATACG
CAAGCGAACT TCAAAACGGC GTTCTGGAAG TCCAACCTCC TGGATTACAA GCCTTTTGAG
CAGTGGGAAG AAGAAGGCGC GCGCGACACC TACAAACTTG CCTCGGCGCG TGTGGAACAT
CTGCTCGCCA CCTACAAACA GCCCGAACTG GATCCCGCGA TCCGTGAGGC GCTGATGGCT
TACATCGCAG AAAAGAAAGC CTCGATGCCC GACGCCTTTA TGTAA
 
Protein sequence
MTDAAPRRRS RGGGGAARRA ERTSVKIETA KYIERNIPNY EVLTEEALEV IETNAETILE 
EVGVNFVDNP AALERWRDAG ADVQGERVRI PRGLARKLCE TAPSQFTQHA RNPEKSVEIG
GKNLVLAPIY GPPFVRDANG GRRYATLEDF QKFVKLGYMS KWLHHSGGTV CEPTDVPVNK
RHLDMLMAHI ELSDKPFMGS VTEPSRAQDT VDMCGILFGK DFVQENTVTT SLININSPMT
FDDVMMGALE VYAKNNQACI ISPFIVGGAM APVTIAGTLT QVLAEVLAGV AYSQLIRPGA
PVIFGAFVSS IDMNSGAPTF GTPEASMVTY GAGQLARRLN LPFRSAGSFC GSKLPDAQAA
YETANSLNMG LLSGVNFMLH SCGWLEGGLV ADFEKFVMDA DQLGVLHGLA KGIQMDENGQ
GLDAIREVGP GGHYLGCAHT QANFKTAFWK SNLLDYKPFE QWEEEGARDT YKLASARVEH
LLATYKQPEL DPAIREALMA YIAEKKASMP DAFM