| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1359 |
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| Symbol | |
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| ID | 4076376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1451445 |
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| End bp | 1452863 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006669 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_613354 |
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| Protein GI | 99081200 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATA TTCTGATTGT TGATGATGAA CGTGACATCC GGGAGCTGGT TTCAGACATC
CTGGAGGACG AAAGCTATGC CACGCGCAAA GCGGCCAACT CCGAAGAATG CATGGCCGCC
TTTGAAGACG CTCCGCCTGC GCTGCTGATT TTGGACATCT GGCTCAAAGA CAGCCAGATG
GATGGGATCG ACATCCTGAA AACCGTAAAG CGGGATTACC CGGAGGTTCC GGTGGTCATC
ATCTCGGGGC ACGGGAATAT CGAAATTGCG GTCGCGGCGA TCAAGCAGGG CGCTTATGAC
TTCATCGAGA AGCCCTTTAA TATCGACCAG TTGATGGTTG TGATCCGGCG CGCGATGGAG
ACCTCTCGCC TGCGTCGCGA AAACACGGAT CTGCGCCGCA AGGATGTAGG TGCAACCGAT
ATGGTCGGGA CGTCGCCCGC GTTTCGTGCC TTGACCAGCC AGCTTGACAA GGTGACGAAA
TCCAATGGGC GCGTCATGCT CACCGGGCCT GCGGGCAGCG GCAAGGAAGT AGCAGCCCGC
TATATTCACG CAAACTCCCA CCGCGCCAGT GAGCCTTTTG TCACCGTGAA TTGCGCCAGC
ATTGAGCCCG AGCGCATGGA AGATGTGCTC TTTGGGCGTG AGAGCAGCGA ACGCGGCGTC
GAGCCGGGGC TGCTGGAGCA GGCAGATGGG GGCGTCGTCT TTTTTGACGA AGTGGCGGAT
ATGCCCCCCG GCACCCAATC CAAGATCCTG CGCGTGCTGG TGGATCAGCA GTTTGTGCGC
GTTGGCGGCA CCGAGAAGGT CAAGGTGGAC CTACGGGTGA TCTCGGCCAC AAATCGCGAT
CTCGAACAGG AGATCAAGGA TGGCAACTTC CGTCAGGAAT TGTATCACCG TCTGAATGTG
GTTCCGATCT GCGTGCCATC GCTCTCGGAC CGGCGCGAGG ACATCCCGCT GCTGGCGGAG
TATTTCATCC AAGGCTTCAA CCAGACGCAG GGCCTGCCAC TGCGCGCCCT TAGCGAAGAC
GCCGTGGCCT TGATGCAGAC GATGACCTGG CCGGGCAATG TGCGCCAGCT GAAGAATCTG
GTGGAACGCG TTCTGATCCT TGGAGAAACC TCCGGTCCCA TTCAGGCAAA GGATCTGCCG
AGCGAAGAAG AAAAGGTCGA AACAGAAGGT CGCGTCGTGC TCTCTGGCGC CTTGGCTACG
CTGCCTTTGC GCGAGGCACG CGAGGCCTTT GAACGCGAAT ATCTTCTGAC GCAGATCAAT
CGCTTTGGCG GCAACATCAG CCGCACGGCC TCCTTTGTGG GCATGGAACG CTCGGCGCTC
CACCGCAAAC TGAAATCGCT CGGCGTTGTC ACATCGAACA AGGCGGGCGC GCGGGTGGCG
CGGGTCGAGA GCGAGGAAGC CACGGAAGAG ACAGCGTAA
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| Protein sequence | MSDILIVDDE RDIRELVSDI LEDESYATRK AANSEECMAA FEDAPPALLI LDIWLKDSQM
DGIDILKTVK RDYPEVPVVI ISGHGNIEIA VAAIKQGAYD FIEKPFNIDQ LMVVIRRAME
TSRLRRENTD LRRKDVGATD MVGTSPAFRA LTSQLDKVTK SNGRVMLTGP AGSGKEVAAR
YIHANSHRAS EPFVTVNCAS IEPERMEDVL FGRESSERGV EPGLLEQADG GVVFFDEVAD
MPPGTQSKIL RVLVDQQFVR VGGTEKVKVD LRVISATNRD LEQEIKDGNF RQELYHRLNV
VPICVPSLSD RREDIPLLAE YFIQGFNQTQ GLPLRALSED AVALMQTMTW PGNVRQLKNL
VERVLILGET SGPIQAKDLP SEEEKVETEG RVVLSGALAT LPLREAREAF EREYLLTQIN
RFGGNISRTA SFVGMERSAL HRKLKSLGVV TSNKAGARVA RVESEEATEE TA
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