| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1354 |
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| Symbol | |
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| ID | 4076371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1444280 |
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| End bp | 1446769 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006664 |
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| Product | penicillin amidase |
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| Protein accession | YP_613349 |
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| Protein GI | 99081195 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2366] Protein related to penicillin acylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.342409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGCC TCTTCCGCTG GCTCCTCCGC CTCACGGCTG GTACGATTCT GCTTGGTATT
CTGGGGGCGA TCCTGGTCTA TTTCCTCGCG GCGCAGTCCT TGCCAGACTA TGACAAGGAG
ATCGCCCTGC CCGGCCCTAC GGCTCCGGTC GAGATCGTGC GCGACAACGC GAATGTGCCG
CATATCTTTG GCAGCTTTGG TGCCTCGGAT GAGGACGTGT TTTTTGGGCT CGGGTATGCT
CATGCGCAGG ATCGACTGTG GCAGATGGCC GTGATGCGAC GCACGGCGCA GGGTCGGCTT
TCCGAGGTCT TTGGCCCCCG TACCGTCCGC ACAGACAGTT TTTTGCGGCG GCTTGATCTT
TATGGGGCGG CGCGAAGTTC GGTTTCCGCC CAGAGCCCCG AAACGCTCCG GGCGCTGCAG
GCCTATGCTG CGGGCGTGAA TGCGCGCCTG CAAGAGATCA ACGAAGACGC GCTGGGGCGT
GGGGCACCGG AAATGTTCCT GTTCAACATG CCCATAGCGC CGTGGCAGCC CGCCGACAGC
ATCGCCATTA TGAAACTGAT GGCCGTGCAG CTCTCATCCA ATATGCAAGA AGAGATCCTG
CGCGCGCAGA CTTCCATTGC CCTCGATGAT CCCAAACGCC TTGAGGATAT CCTGCCCGAT
GCTCCCGGCT CTGGGACGGC GACGCTTCCG GAATATACGG AGCTGTTTCC CGGCCTCCCG
GGATTTCGTG GTCTCGAGGA ACAGCGCCGG GCGCAAACGG CGCATGCTGC GTTGATGCCC
CTGGCGCCAC GTGGGCTTGG TGGGGCTTCG AATGCCTGGG CTGCGGCGCC CAATCGTTCG
GCGGCGGGTG GCACGCTTCT TGCCAATGAC CCGCATCTGA AGCTGACAGC GCCCGGAACC
TGGTATCTGG CACGTCTTGA GCTTGGCACC GGCGGTGTGA TTGGTGGCAC AATCCCGGGC
ATCCCGGCTG TGCTCACCGG GCGTTCTCAG CAGTTGGGAT GGGGGCTCAC CTCTTCCTAT
CTGGATGATC AGGACCTCTT TATCGAGAAG ATCAACCCGG ACAACCCGCA GCAGTATCTG
ACCCCAAATG GCTACAAGGA CTTCACATCG CGGCCTTCGA TCGTGCAGAT AAAGGGCAAT
GCGCCGCTGA CGCTGACCCT GCGCTGGACC GAAAACGGGC CGGTTCTGCC CGGCTCGCTG
TTTGAGCTCA GCACCATTAC GCCGCCCGGC CACGTTGTGA GCCTAGGGTG GACGGCATTG
TCGCGCGAGG ACACCTCGAT GACTGCGGCG CTCGATCTGA TGCGGGCAGA AAATGTCGCG
CAGGCCATTG CCGCAGGCGA GAACTTCATC GCGCCTTCCC AAAATATCAC GCTGGCGGAT
CATGACACCA TCGCGCTCAA GACCGTGGGC GTCATGCCCG ACCGCGACCT GCGCAACCAA
AGCCGGGGAC GCCTGCCCAA CCAGGGCTGG CGGCGCGAAA ACCGCTGGCA AGGGCGCTTG
CCCTATGCGG CGAACCCGGA GTTCATTGCG CCCAGCGGTG GGATTTTGGG AAATACAAAC
AACAAGTTGC TAGAGCGCCC CTTTCCCAAC CACGTCAGTT ATTCCTGGGG CGACACACAG
CGGATCAATC GCTGGCGCCG TCTGATGCAG AGCCGCGAGG TGCATACCCG CGACAGTTTC
ATCGAAGCGC AGCTCGATAC GGTTTCCTAT AGCGCGCAAA CCCTCCTGCC TCTTATCGGG
GCGGATCTGT GGTTCACCGG TGAAGCTGCG CCCAATGGCA CGCCGGAACG CCAGCGCCAG
ATCGCATTGT CGCTCTTGGC GGAGTGGAAC GGCGAGATGA ACGAGCATTT GCCCGAGCCT
CTGATCTACG CAAGTTGGGT GCGTGCTTTG CAAAAACGTC TGATCGAGGA CGACCTAGGC
CCCCTTGCGG ATGCGTTTGA CCGGGTTGAG CCGCTGTTCC TGGAACGGGT GTTCCGCAAT
ATCGATGGCG CTGCAGCCTG GTGTGATGTC GCCCAGAGCG CCCCGACCGA GAGCTGCACC
GACATGGCGC GCCTCGCGCT GGACGACGCG CTCGTCTACA TCAGCGAAAA CTACGGCAGT
ACATTGGAAA GCCTGCGCTG GGGGGATGCG CATCAGGCCA CCCAGGATCA CGAGGTCTTG
GGCGAGGTGC CGTTCCTGCG CTATTTCGTC AACATCCGTC AATCCACCAG TGGTGGAGAC
AATACGCTGC AGCGCGGCCT CACCTCGGGC GAGGAGCCGG CGCCCTTCAA CAATGTGCAT
GGGGCGGGCT ATCGCGGTGT CTATGATTTC GCCGATCCCG AAAGCTCTGT TTTCATTATA
GCAACAGGCC AGTCCGGGCA TTTCCTGTCG CGCTACTACG ATGACATGGC ACAGTACTGG
CGGCGTGGGG AGTATATCCC GATGTCTCTC GACGAAAAAC TGGCGCGCGC CGCTTCCGTC
GGCGTCACCC GTATCCTGCC GCGCAACTAA
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| Protein sequence | MARLFRWLLR LTAGTILLGI LGAILVYFLA AQSLPDYDKE IALPGPTAPV EIVRDNANVP
HIFGSFGASD EDVFFGLGYA HAQDRLWQMA VMRRTAQGRL SEVFGPRTVR TDSFLRRLDL
YGAARSSVSA QSPETLRALQ AYAAGVNARL QEINEDALGR GAPEMFLFNM PIAPWQPADS
IAIMKLMAVQ LSSNMQEEIL RAQTSIALDD PKRLEDILPD APGSGTATLP EYTELFPGLP
GFRGLEEQRR AQTAHAALMP LAPRGLGGAS NAWAAAPNRS AAGGTLLAND PHLKLTAPGT
WYLARLELGT GGVIGGTIPG IPAVLTGRSQ QLGWGLTSSY LDDQDLFIEK INPDNPQQYL
TPNGYKDFTS RPSIVQIKGN APLTLTLRWT ENGPVLPGSL FELSTITPPG HVVSLGWTAL
SREDTSMTAA LDLMRAENVA QAIAAGENFI APSQNITLAD HDTIALKTVG VMPDRDLRNQ
SRGRLPNQGW RRENRWQGRL PYAANPEFIA PSGGILGNTN NKLLERPFPN HVSYSWGDTQ
RINRWRRLMQ SREVHTRDSF IEAQLDTVSY SAQTLLPLIG ADLWFTGEAA PNGTPERQRQ
IALSLLAEWN GEMNEHLPEP LIYASWVRAL QKRLIEDDLG PLADAFDRVE PLFLERVFRN
IDGAAAWCDV AQSAPTESCT DMARLALDDA LVYISENYGS TLESLRWGDA HQATQDHEVL
GEVPFLRYFV NIRQSTSGGD NTLQRGLTSG EEPAPFNNVH GAGYRGVYDF ADPESSVFII
ATGQSGHFLS RYYDDMAQYW RRGEYIPMSL DEKLARAASV GVTRILPRN
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