Gene TM1040_1323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1323 
Symbol 
ID4078366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1409154 
End bp1409492 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content53% 
IMG OID638006631 
Producthypothetical protein 
Protein accessionYP_613318 
Protein GI99081164 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.581976 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGAC CAACCCAACT TGAACCAAAC GTGATCACTG AACAGGGCCT ACGCGAGCTT 
GCTGAGAAGG GGCATGGGGT CGAAGTGTTG TGTCAGACCG TCCCGGAACG CAAAGGACCA
AGCTGGTATG GCCGTTGGAT TATGCGGACT ATAGGGGCTG ACGGTAAGGA AAAGCTCCTT
GTAACTGCAA GGACTCGCTT GACGCAGAAT TCGATCAAGG TGCGAGAGTT CAAAACAGCG
ACAGGTGTGA TTTCCTTCTT GATTGGCATT GGGTTCGATC ACGCAGACAT CCCGCTCCGA
GAAGGTGAAA CGACCCTGCA CAAGCTACTC AACGGCTAG
 
Protein sequence
MTRPTQLEPN VITEQGLREL AEKGHGVEVL CQTVPERKGP SWYGRWIMRT IGADGKEKLL 
VTARTRLTQN SIKVREFKTA TGVISFLIGI GFDHADIPLR EGETTLHKLL NG