Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1285 |
Symbol | |
ID | 4077445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1382990 |
End bp | 1383349 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638006593 |
Product | hypothetical protein |
Protein accession | YP_613280 |
Protein GI | 99081126 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.182713 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTTG ATACGTCATG GTGCATCAAG GGTGGTTCGC GTGGCTATGT AACCACGCGA ACCGTAACCT GGCACCTGAT GTGGAAAACA TCACCATTTG TTCTGACAAT TCCGCCGGGC CGTGAATTTG AAAGCTCTGT ACCTCGCGTT TTGCAATGGA TCTGGTCGCC AGATGATCCC TATTACCTTA AAGCGGCATT GATACATGAC ACGCTTCTCG AGAACGGATC TCGCGCTTTC GAGGCCGACG CACAATGGCG AGCAGCTGCT TTGAGCGATC ATGCGCCCCC ACTTCGCACG ACCATCGCTT TTGTCGCGAT GTGGGCCCGC CGCTTAGGTC AATCTGCATT GGGACTGTGA
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Protein sequence | MALDTSWCIK GGSRGYVTTR TVTWHLMWKT SPFVLTIPPG REFESSVPRV LQWIWSPDDP YYLKAALIHD TLLENGSRAF EADAQWRAAA LSDHAPPLRT TIAFVAMWAR RLGQSALGL
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