Gene TM1040_1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1285 
Symbol 
ID4077445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1382990 
End bp1383349 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content54% 
IMG OID638006593 
Producthypothetical protein 
Protein accessionYP_613280 
Protein GI99081126 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.182713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTTG ATACGTCATG GTGCATCAAG GGTGGTTCGC GTGGCTATGT AACCACGCGA 
ACCGTAACCT GGCACCTGAT GTGGAAAACA TCACCATTTG TTCTGACAAT TCCGCCGGGC
CGTGAATTTG AAAGCTCTGT ACCTCGCGTT TTGCAATGGA TCTGGTCGCC AGATGATCCC
TATTACCTTA AAGCGGCATT GATACATGAC ACGCTTCTCG AGAACGGATC TCGCGCTTTC
GAGGCCGACG CACAATGGCG AGCAGCTGCT TTGAGCGATC ATGCGCCCCC ACTTCGCACG
ACCATCGCTT TTGTCGCGAT GTGGGCCCGC CGCTTAGGTC AATCTGCATT GGGACTGTGA
 
Protein sequence
MALDTSWCIK GGSRGYVTTR TVTWHLMWKT SPFVLTIPPG REFESSVPRV LQWIWSPDDP 
YYLKAALIHD TLLENGSRAF EADAQWRAAA LSDHAPPLRT TIAFVAMWAR RLGQSALGL