| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1262 |
|---|
| Symbol | |
|---|
| ID | 4077656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 1359739 |
|---|
| End bp | 1360779 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638006570 |
|---|
| Product | phosphate ABC transporter, periplasmic phosphate-binding protein |
|---|
| Protein accession | YP_613257 |
|---|
| Protein GI | 99081103 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTTTG TGAAACTGAC CGCATCCACT CTCGCCATCG CAGCCGTATC GGCCACCGCA
GCTTCTGCGC GTGAGCAGGT GCAGGTCGCA GGTTCTTCCA CCGTTCTGCC CTATGCTTCG
ATCGTTGCCG AAGCCTTTGG CGAAAACTTC GACTTCCCGA CACCGGTTGT CGAATCCGGT
GGATCCTCCG CCGGCCTCAA GCGTTTCTGC GAAGGCGTTG GCGAAAACAC CATCGACATT
GCAAACGCCT CCCGCGCGAT CAAAGAAAAA GAGATCAAGG CCTGTGCCGA AGCCGGCGTG
ACCGACATCA TCGAAGTCCG CATCGGTTAT GATGGCATCG TGTTTGCCTC CGACATCGAC
GGCAACGGTT TTGAATTCAC CCCGACCGAT TGGTTCCTCG CGCTCTCCGA CAAAGTTGTT
GTTGACGGCG CGCTGGTCGA CAACCCGAAC AAGACCTGGG CCGATGTAAA CGCCGCCTTC
CCGGCACAGC CCATCCAGGC CTTCATCCCC GGCACCAAGC ACGGCACCCG CGAAGTCTTT
GAAGACAAAG TGATCCTCGC TGGCTGTGAA GAAACCGGCG CGTTCGATCT GCTGAAAGAA
GCCAACGGTG GCGACAAGAA AGCAGCCGAA AAAGCCTGTA TCGCTCTGCG CACCGACGGC
GTGTCCGTGG ACATCGACGG CGACTACACC GAGACCCTCG CACGTATCGA CTCCAACAAG
GACGGTATCG GCGTGTTCGG TCTGGCCTTC TACGAGAACA ACACCGACAA GCTGCAGGTT
GCAACCATGT CCGGCGTTGT TCCCTCCACC GAATCCATCG CAACCGGCGA ATATCCGGTG
TCCCGCCCGC TGTACTTCTA CGTGAAGAAA GCGCACATCG GCGTAATCCC CGGCCTCAAG
GAATTCGCTG AGTTCTTCGT TGCAGATGAA GTTGCTGGCC CCGACGGCCC GCTGGCCGAA
TACGGCCTCG TAGCAGACCC CGAGCTTGCA AAGACTCAGG AAGCTGTTGC AGCAGAAGCA
ACCATGGGCG GCAACTCCTA A
|
|---|
| Protein sequence | MSFVKLTAST LAIAAVSATA ASAREQVQVA GSSTVLPYAS IVAEAFGENF DFPTPVVESG
GSSAGLKRFC EGVGENTIDI ANASRAIKEK EIKACAEAGV TDIIEVRIGY DGIVFASDID
GNGFEFTPTD WFLALSDKVV VDGALVDNPN KTWADVNAAF PAQPIQAFIP GTKHGTREVF
EDKVILAGCE ETGAFDLLKE ANGGDKKAAE KACIALRTDG VSVDIDGDYT ETLARIDSNK
DGIGVFGLAF YENNTDKLQV ATMSGVVPST ESIATGEYPV SRPLYFYVKK AHIGVIPGLK
EFAEFFVADE VAGPDGPLAE YGLVADPELA KTQEAVAAEA TMGGNS
|
|---|
| |