| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1254 |
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| Symbol | |
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| ID | 4077648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1349387 |
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| End bp | 1351786 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006562 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_613249 |
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| Protein GI | 99081095 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0777915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAAG ACCTTCCCGC ACACGCCTCC GTAGTCGTCA TCGGCGGCGG CATCATGGGG
TGTTCGACAC TCTATCACCT CGCAAAGATG GGAGCGCACG ACGCGATCCT GCTCGAACGC
AACCAGCTGA CCTCTGGCAC CACCTGGCAC TCTGCGGCTC AGGTGCGGGC GCTGCGCCAT
TCGCGCAACC TCACCCGAAT GATCCAATAC TCGGTGGAGC TCTACAGCCA GCTCGAGCGT
GAAACCGGGC AGAGTGTTGG CTGGATTCAA AAAGGCTCCC TGTCGCTGGC CACCAATCCT
GACCGGCTGG TTCATATCCA GCGGCAGGAG GCGCTTGCAC ATGCCTATGG TATTGAAGCG
ACATCGATTT CACCGCAGGA GGCCAAAGAA CGCTGGCCGC TGATGAACGC GGATGATGTG
CTTGGCGCAG TGTGGTCGCC CGATGATGGC CGGGTCTCGC CTTCGGACGT CTGTGCCGCA
TTGGTCAAGG GCGCAAAATC CCTGGGTGCG CGTCTCTTTG AACAAACTGG TGTGACGGGA
ATTCTGACGG AGAATGGCCG CGTCAAAGGA GTCGAAACGA GCCGCGGTGT CGTCATGTGC
GATGCGATTG CCCTATGTGC GGGGCTGTGG TCGCGTGAGA TCGGTGCCAT GGCCGGGGCC
GAGGTCCCTG CCCTTGCCTG CGAGCATTTC TACCTGCTGA CCAAGCCGAT TGACGGAATC
CAGGGCAACA CGCCGACCCT CTCGGATCAC GACAACCATC TGTATATTCG AGACGATTCC
GGCGGGCTGC TGGTGGGTTG TTTTGAACCC ATGGGCAAAG CAATCGCGCC CGGGCGTCTT
GATGAAAGCT TTGAATTTGG CCTGCTCCCC GAGGATTGGG ACCATTTTGA GCCGATGATG
CTGAACGCGC TGCACCGTTT GCCCGCATTG GAAACGGCAG AGGTCAAAAT GCTGCTTAAC
GGCCCCGAGA GTTTCACGCC CGATGGCACG TTTATGCTCG GTGAAACCGC CGAGACGCGT
GGGTTGTTCT TGGGGTGTGG GATGAATTCG GTGGGGATCG CGTCGGGAGG TGGCGCGGGC
ATGAACCTTG CGCATGCAAT CCTGCATGGC GCGCCAGCCT ATGATCTCTC TGAAGCGGAC
GCAAAGCGCT TTGCGCCGGT CTTCAATTCA TTGGATCACC TGATGGCGCG CGCGCCCGAG
ATCCTCGGCA CCCATTACGA AATTGCATAC CCGGACCGAC AATTGTCTAC TGCGCGCAAT
CTGCGCCCCC TGCCCGTTCA CGCGGCGCAT GTCTCGTCCG CTGCGCATTT TGGTCAGGTC
TACGGGTGGG AACGCCCGCT TTATTTCGGA AGGACCGCGG AACCAAGGCT GAGGTTCGAA
CGGCCGGACT GGTTCTCCAA TGTCGCCAAT GAGGTCAAGG CCGCACACAC CCGTGCTGCC
GTGTTTGATG CCTCTTCCTT TGGCAAAATT GACGTGACAG GACCGGATTC TGAGGCGTTT
CTTTTGCATG TTTGTTCGGG TCACATGGCG CGCGCGCCCG GATCCGTCAT CTATACCGCC
ATGCTGAACG AACATGGGCG GTTTGAATCT GACATCACGG TGCACCGACT TGCGACAGAT
CATTACCGTT TGTTTGTCGG CACAGCGGCC ATCAAGCGAG ACATGGCCTG GCTTCTGCGG
CACAGCCGCG AGTTCGACGT AAAGATATGT GATACAACAG AAGATTTCGC CACCTTTGGT
TTGATGGGGC CAGAGGCTAT GCGCATTGCG CGCGATCTTG GCGCCGCAGA GCTGGCCTCA
CTTGGCTATT TCAAACATGG CGAAGCGATG ATCGCGGGGC ATCCTGTGCG CGCGGCCCGG
CTCTCTTATG TTGGCGAGGC TGGTTGGGAA ATCACCTGCA AGACTACATC CGCGCAAGAG
GTCTACACCG CGCTCCTTGA TGCAGGTGCG ACCCCGGCCG GGCTCTATGC GCAGACCTCC
ATGCGCATCG AGAAAGGGTT CTGCGCGATG GGGCATGAAT TGGACAGCGA TGTAAGCCCG
CTTGAGGTCG GCCTTGGTTT CGCCCTACGC AAGAGTGGTG GCTTTATCGG TGCTCAAGCG
CTTGAAGAGA TGAAGAAAAA AAGCCTCAAC CATCAAATCG TTTCGCTCCT GTTCGAGGAG
GTGGATGTGG TGCCGCTGGG GCATGAGCCG GTCAGTGCGC GCGGTGACAT CATCGGGCAT
ACGACCTCCT GTGCCTTTGG CTACCGCATC GGGCGCCCGG TCGCTTTGGC TTTTTGCAAA
GCGGGATTGG AAACCGGCCA TGAGGTAGAG GTCAATATTG CAGGGCGTCG GGCGACAGCG
CGGGTTCAGA TTGGGCCGGT GTTCGATCCT GAAGGCCTCC GGATGCGCGA CATTGGCTAA
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| Protein sequence | MPKDLPAHAS VVVIGGGIMG CSTLYHLAKM GAHDAILLER NQLTSGTTWH SAAQVRALRH
SRNLTRMIQY SVELYSQLER ETGQSVGWIQ KGSLSLATNP DRLVHIQRQE ALAHAYGIEA
TSISPQEAKE RWPLMNADDV LGAVWSPDDG RVSPSDVCAA LVKGAKSLGA RLFEQTGVTG
ILTENGRVKG VETSRGVVMC DAIALCAGLW SREIGAMAGA EVPALACEHF YLLTKPIDGI
QGNTPTLSDH DNHLYIRDDS GGLLVGCFEP MGKAIAPGRL DESFEFGLLP EDWDHFEPMM
LNALHRLPAL ETAEVKMLLN GPESFTPDGT FMLGETAETR GLFLGCGMNS VGIASGGGAG
MNLAHAILHG APAYDLSEAD AKRFAPVFNS LDHLMARAPE ILGTHYEIAY PDRQLSTARN
LRPLPVHAAH VSSAAHFGQV YGWERPLYFG RTAEPRLRFE RPDWFSNVAN EVKAAHTRAA
VFDASSFGKI DVTGPDSEAF LLHVCSGHMA RAPGSVIYTA MLNEHGRFES DITVHRLATD
HYRLFVGTAA IKRDMAWLLR HSREFDVKIC DTTEDFATFG LMGPEAMRIA RDLGAAELAS
LGYFKHGEAM IAGHPVRAAR LSYVGEAGWE ITCKTTSAQE VYTALLDAGA TPAGLYAQTS
MRIEKGFCAM GHELDSDVSP LEVGLGFALR KSGGFIGAQA LEEMKKKSLN HQIVSLLFEE
VDVVPLGHEP VSARGDIIGH TTSCAFGYRI GRPVALAFCK AGLETGHEVE VNIAGRRATA
RVQIGPVFDP EGLRMRDIG
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