| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1241 |
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| Symbol | |
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| ID | 4076356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1335882 |
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| End bp | 1336925 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006549 |
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| Product | aminotransferase, class V |
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| Protein accession | YP_613236 |
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| Protein GI | 99081082 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGTG TTTATTTAGA TCATAACGCC ACATCGCCCC TGCGCCACGA CGCGCGGGCA
GCGATGATCG CGGCCATGGA TGTGTGCGGC AACCCGTCGT CGGTGCACGC CGAAGGACGC
GCGGCCAAGG CCGTGGTGGA GCGTGCCCGG GCCCAGATTG CAGCGGCCTT TGGCGCCGAC
GGGGCAGACA TCGTGTTTAC CTCGGGTTCG ACCGAGGGAG CCGCACTTGC GTTGATGGGG
CGTGATCTAC ACGGATCCGC GCTTGAGCAT GACGCTGTAA GGGCTTGGAT CAAAGAGGAT
CTTACAGTTG AGGCTCAGGG TCGTGTCGCG GTTTTGGACC CGCAGAGTTC CTGTCTTCAG
CTTGCCAACT CGGAAACCGG CGTCATCCAG GATCTGCCCG AAGGGCTTGC GGTCACGGAT
GCCACGCAGG CCTTTGGAAA GCTGCCGGTC GCCTTCAATT GGATGGGCGC GACGATGGCG
CTCATCTCGG CGCACAAGCT CGGTGGACCC AAGGGTGTCG GGGCGGTTGT GCTGAAGCGC
GGGACGGATT TGGCCGCGCA GATCAAGGGT GGCGGCCAGG AGATGGGGCG CCGCTCCGGG
ACGGAAAATG TTATTGGAAT CGCAGGGTTC GGCGCCGCAG CTGAAGCAGC CGCGAAGGAT
CTTGATAACG GTGTCTGGGA CCGGGTTGCA GAAATTAGAA ATATTCTAGA AAAGGCGGTT
GCGGCCCAGT GCCCGGGCAC TATTTTTATT GGCAACGAGG CGCGCCGCCT GCCCAATACC
TCGTGTTTTG CGACCCCCGG CTGGAAGGGC GAGACGCAGG TGATGCAGAT GGACCTTGCG
GGGTTTGCCA TCAGCGCGGG GAGCGCCTGC TCTAGCGGCA AGGTGCGCGC AAGTGCGGTT
CTGACCGCGA TGGGATTTGA TGAGAAGACA GCTCAGGGAG CGATCCGCGT ATCGCTTGGG
GCTGACACGA CCGAAACGGA TGTGCTGCGG TTTGCAGAAA CGTGGTGCGC CAAACAGAAG
AAACATCGCG CCCGCTCGGC GTGA
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| Protein sequence | MTRVYLDHNA TSPLRHDARA AMIAAMDVCG NPSSVHAEGR AAKAVVERAR AQIAAAFGAD
GADIVFTSGS TEGAALALMG RDLHGSALEH DAVRAWIKED LTVEAQGRVA VLDPQSSCLQ
LANSETGVIQ DLPEGLAVTD ATQAFGKLPV AFNWMGATMA LISAHKLGGP KGVGAVVLKR
GTDLAAQIKG GGQEMGRRSG TENVIGIAGF GAAAEAAAKD LDNGVWDRVA EIRNILEKAV
AAQCPGTIFI GNEARRLPNT SCFATPGWKG ETQVMQMDLA GFAISAGSAC SSGKVRASAV
LTAMGFDEKT AQGAIRVSLG ADTTETDVLR FAETWCAKQK KHRARSA
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