Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1229 |
Symbol | |
ID | 4075937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1324244 |
End bp | 1324903 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 638006537 |
Product | hypothetical protein |
Protein accession | YP_613224 |
Protein GI | 99081070 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTGGTTAA GGATAGGTTT ACAAAGCGAA GACAGTTTGA ACTATTGCCG GAGCTTTAAC GTCATGATGG TATTTTACTG CGCGCGGCTG GTGCTGCTTT CGGTGCCCAA GACCGGCACA ACCGCCCTGC AGAGCGCGCT GAGGCCTCAT GCCGATCTGG TGATTTCCGA CCCGCCAGAG CTCAAACATG CGCCGCTCTA TCGCTACAAT CGCTGGATCC GTCCGATGTT TGAGAAGGTC TGCGATGCCG AACTCGAAGT CGCCGCCATC ATGCGCGAGC CGATCAGCTG GCTCGGCAGC TGGTACCGGT TTCGCCAACG TCCGCATCTG GACGGGCAGC CCGCATCAAC CAAAGACCTC AGCTTTGATG AATTCGTGAC TGACTATTGC CGCGGCAAAC GACCCGCTCA TGCCAATGTA GGAAGTCAGG CCAAGTTCCT GGAATCTCAG CCAAATGGCT GTCGTGTGAC GCATCTCTTC GCCTATGAAG ACCTCGCGCC CTTTCACGCC TTTTTGAGGG ATCGTACGGG CCTCAGTTAT GAAACGCAGC CGGAAAATGT GAGCCCCAAG GGCGATCTAA CACTTTCAGC CGCCACGGAG CAGAAATTCA GGCGCAAACA CCCTGAGGAG TTTGAGCTCT ATCAATCGAT CACCACCTGA
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Protein sequence | MWLRIGLQSE DSLNYCRSFN VMMVFYCARL VLLSVPKTGT TALQSALRPH ADLVISDPPE LKHAPLYRYN RWIRPMFEKV CDAELEVAAI MREPISWLGS WYRFRQRPHL DGQPASTKDL SFDEFVTDYC RGKRPAHANV GSQAKFLESQ PNGCRVTHLF AYEDLAPFHA FLRDRTGLSY ETQPENVSPK GDLTLSAATE QKFRRKHPEE FELYQSITT
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