| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1221 |
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| Symbol | |
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| ID | 4075929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1311374 |
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| End bp | 1312582 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006529 |
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| Product | 3-oxoacyl-[acyl-carrier-protein] synthase II |
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| Protein accession | YP_613216 |
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| Protein GI | 99081062 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.167242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGGG TTGTGATTAC CGGCGCCGGG ACCATCAACG CGCTGGGGCA TTCGGTCGCC
GAAACCTTGG AGTCCATGCG TGAAGGGCGT TGCGGAATTG GCGAGTTGGA CTTTCGCGAT
GTTGATCGTC TTGCGATTAA GATAGGCGGG CAAGTCCAGA ATTTCGAAGC AGAAGGTCGC
TTCAATCGCC AGCAGATGGT GCTCTACGAT CGGTTCACGC AGTTCACCTT GGTGGCGGCC
TCTGAGGCGA TCCGTCAATC CGGTCTCGAG TTCACCGGCG ACCTGGCTGC GCGGTCCGGG
GTCGTGCTGG GAACGGCAGG CGGTGGTGTC TCGACCTGGG ATGACAACTA CCGATCGGTC
TACGAGGATG GCAAGAATCG CGTGCATCCT TTTGTTGTTC CGAAACTTAT GAACAACGCC
GCTGCCAGCC ATGTGTCGAT GGAATACAAC CTCAAGGGGC CGAGCTTTAC GGTTTCTACC
GCCTGTGCGT CCTCAAATCA TGCGATGGCG CAGGCCTTTC AGATGGTGCG CAGCGGCATG
AGTCCCGCCA TGGTCACGGG TGGGTCTGAA TCGATGCTCT GCTTCGGCGG GGTGAAGGCG
TGGGAAGGAC TGCGCGTGAT GTCCAAGGAC GCCTGCCGCC CCTTCAGTGC CAACCGCAAT
GGCATGGTGC AGGGCGAGGG TGCTGGGATC TTTGTGTTTG AGGAATATGA ACACGCCAAG
GCCCGCGGCG CGGAGATCCT GTGCGAAGTG ATCGGCTACG CCATGAGCTC GGATGCGGCC
GACATTGTGA TGCCCAGCAA ACAGGGCGCG GCGCGTGCAA TCTCGGGCGC GCTCAGGGAT
GCTCAGATCA ACGCCAGCGA CGTGGGGTAT ATCAACGCGC ATGGGACCGG CACCGCCGCC
AATGACAAGA CCGAATGCGC AGCTGTTGCG GATGTCTTTG GGCCGCATGC TGATAACCTC
ATGATTTCGT CAACAAAATC CATGCACGGT CACCTTATTG GTGGGACGGG CGCGGTGGAG
CTTTTGGCCT GTATCATGGC GTTGCGCGAC GGGGTGATCG CGCCGACCAT CGGCTATGAA
GAGGCCGACC CTGAATGCGC GCTGGACGTG GTGCCCAATG AGGCGCGAGA GGCCAAGGTA
GACGTGGCCT TGTCAAATGC TTTTGCCTTT GGCGGCCTCA ACGCTGTGCT AGCGCTGCGT
CGGGTCTGA
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| Protein sequence | MKRVVITGAG TINALGHSVA ETLESMREGR CGIGELDFRD VDRLAIKIGG QVQNFEAEGR
FNRQQMVLYD RFTQFTLVAA SEAIRQSGLE FTGDLAARSG VVLGTAGGGV STWDDNYRSV
YEDGKNRVHP FVVPKLMNNA AASHVSMEYN LKGPSFTVST ACASSNHAMA QAFQMVRSGM
SPAMVTGGSE SMLCFGGVKA WEGLRVMSKD ACRPFSANRN GMVQGEGAGI FVFEEYEHAK
ARGAEILCEV IGYAMSSDAA DIVMPSKQGA ARAISGALRD AQINASDVGY INAHGTGTAA
NDKTECAAVA DVFGPHADNL MISSTKSMHG HLIGGTGAVE LLACIMALRD GVIAPTIGYE
EADPECALDV VPNEAREAKV DVALSNAFAF GGLNAVLALR RV
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