Gene TM1040_1214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1214 
Symbol 
ID4075922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1302602 
End bp1303312 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content59% 
IMG OID638006521 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_613209 
Protein GI99081055 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.528512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGCG AGGAATGGAT CAACCGTCGG CTGCATGGTG ACGGCGTGGT CGAGCTACAG 
TTGGGGCATG CGCCTCAAAA CCAGCTCACG TCAGCTTTTC TGAAGGATTT TGCGCAAGAA
ATCAATGAGA TGCGTTCTGA TTCTGACGTG AGGTCCGTGC TGTTGACCAG CCCGTTCAAG
GATTTTTCGA CCGGCGTAGA TCCTGAACTT AAGGATGTCA GCGCGCTGGA AGGTGACCTC
AACGCTGCAT TTCTGGCGCT CTATGCCTTC CCCAAGCCTG TTGTCGTTGC TTCTGTCGGC
CTGAGCTCCG GGGCGGGCAT GTTTTTTGTA TTGGCCAGCG ACCTGCGGGT CGCCCACGCG
CGGGCCGGAT TTGAGCTGAT CGACGTACAG TTGGGACGTG CCTATCCCGC CGCCTTGATG
GAGATTGCCC GCGCGACGCT TGATACCAAC ACCCAGCGAC GCTTGATGCT CACTGGACAG
CGCCTCGGTC CGATTGCGGC CCGCAACGCG CAGTTCATCG AAGTCTTGGC AGATGACCTT
GAGGATCTGC ACGGTTACGC CCTGAAAGAG GCCCGACGTA TGGCGCAACT GCCGGCGGAG
GCTTATGCGG CGATCAAACG CGATCTGCGG ACCGATACAA TCAAAAGGAT CGAATCCCGC
CTGGACGCCG CATTGCAGCC CACTTTTGGC ACGTCGCGCC TCGCGAGCTG A
 
Protein sequence
MEREEWINRR LHGDGVVELQ LGHAPQNQLT SAFLKDFAQE INEMRSDSDV RSVLLTSPFK 
DFSTGVDPEL KDVSALEGDL NAAFLALYAF PKPVVVASVG LSSGAGMFFV LASDLRVAHA
RAGFELIDVQ LGRAYPAALM EIARATLDTN TQRRLMLTGQ RLGPIAARNA QFIEVLADDL
EDLHGYALKE ARRMAQLPAE AYAAIKRDLR TDTIKRIESR LDAALQPTFG TSRLAS