Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1214 |
Symbol | |
ID | 4075922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1302602 |
End bp | 1303312 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638006521 |
Product | enoyl-CoA hydratase/isomerase |
Protein accession | YP_613209 |
Protein GI | 99081055 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.528512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGCG AGGAATGGAT CAACCGTCGG CTGCATGGTG ACGGCGTGGT CGAGCTACAG TTGGGGCATG CGCCTCAAAA CCAGCTCACG TCAGCTTTTC TGAAGGATTT TGCGCAAGAA ATCAATGAGA TGCGTTCTGA TTCTGACGTG AGGTCCGTGC TGTTGACCAG CCCGTTCAAG GATTTTTCGA CCGGCGTAGA TCCTGAACTT AAGGATGTCA GCGCGCTGGA AGGTGACCTC AACGCTGCAT TTCTGGCGCT CTATGCCTTC CCCAAGCCTG TTGTCGTTGC TTCTGTCGGC CTGAGCTCCG GGGCGGGCAT GTTTTTTGTA TTGGCCAGCG ACCTGCGGGT CGCCCACGCG CGGGCCGGAT TTGAGCTGAT CGACGTACAG TTGGGACGTG CCTATCCCGC CGCCTTGATG GAGATTGCCC GCGCGACGCT TGATACCAAC ACCCAGCGAC GCTTGATGCT CACTGGACAG CGCCTCGGTC CGATTGCGGC CCGCAACGCG CAGTTCATCG AAGTCTTGGC AGATGACCTT GAGGATCTGC ACGGTTACGC CCTGAAAGAG GCCCGACGTA TGGCGCAACT GCCGGCGGAG GCTTATGCGG CGATCAAACG CGATCTGCGG ACCGATACAA TCAAAAGGAT CGAATCCCGC CTGGACGCCG CATTGCAGCC CACTTTTGGC ACGTCGCGCC TCGCGAGCTG A
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Protein sequence | MEREEWINRR LHGDGVVELQ LGHAPQNQLT SAFLKDFAQE INEMRSDSDV RSVLLTSPFK DFSTGVDPEL KDVSALEGDL NAAFLALYAF PKPVVVASVG LSSGAGMFFV LASDLRVAHA RAGFELIDVQ LGRAYPAALM EIARATLDTN TQRRLMLTGQ RLGPIAARNA QFIEVLADDL EDLHGYALKE ARRMAQLPAE AYAAIKRDLR TDTIKRIESR LDAALQPTFG TSRLAS
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