| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1155 |
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| Symbol | |
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| ID | 4075941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1246601 |
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| End bp | 1247377 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638006460 |
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| Product | hypothetical protein |
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| Protein accession | YP_613150 |
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| Protein GI | 99080996 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0425779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTTG ACGATGACCT GATTGCCTGC GCCGAGGCGG TTCAGAAGGG CGATCCAGAC
CGGTTCCTGG CCGCAATGGC CGCGCCGGTA GAGGCGCGTG CTGTGCTGTT TGCCCTCTAT
GCGTTCAACC TGGAGATTTC GCGTGCGCCC TGGGCCAGCC AGGAAAGCAT GATTGCAGAG
ATGCGGGTGC AATGGTGGCG TGATGTGGGC GCAGAGATCG CCGCAGGCGG GCCGGTGCGC
AGACACTATG TGGCGACACC TCTCACGCGG CTTGTTGATC GCAGCGCGGC GCGAGCGATT
GACGCGATGG CGGAGGCGCG ACGCTGGGAC ATCTACCGCG ACCCTTTTGA GGATGAGGCG
GCGTTTGATG CCTATATCGA CGCAAACGCC GGGGGGCTGA TGTGGATGGC GGCGGCCTCT
CTGGGGGCGG CAGACGAAGC CGTTGTGCGT GACTATGCCT ATGCGGCGGG TCTGGCGGCC
TATATGCGGG CGATCCCGGA GCTTGAGGCG CAACACCGCG TGCCGCTCTT GGATGGGACC
TCTGCAGGGC TGGTCGCCTT GGCAGAGCGT GGGCTGGATC GGCTGGCAGC GGCGCGCCGT
CGCCGGGGCG CGGTCTCACC CGCTGCGCGC GCGGCGCTCC TGCCCGGCTG GCAGGCGGAG
GCGCTATTGC GGCAGGTGCG GGCAGAGCCC GAACGGGTTG GGGCAGGGGC GCTTGGCGTC
AGTGAGTTCC GCCGGCGTAT CAGCCTGATG TGGCAGGCTG GCAGCGGGCG CTGGTAG
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| Protein sequence | MQFDDDLIAC AEAVQKGDPD RFLAAMAAPV EARAVLFALY AFNLEISRAP WASQESMIAE
MRVQWWRDVG AEIAAGGPVR RHYVATPLTR LVDRSAARAI DAMAEARRWD IYRDPFEDEA
AFDAYIDANA GGLMWMAAAS LGAADEAVVR DYAYAAGLAA YMRAIPELEA QHRVPLLDGT
SAGLVALAER GLDRLAAARR RRGAVSPAAR AALLPGWQAE ALLRQVRAEP ERVGAGALGV
SEFRRRISLM WQAGSGRW
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