| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1153 |
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| Symbol | cysS |
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| ID | 4078449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1243613 |
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| End bp | 1244986 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006458 |
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| Product | cysteinyl-tRNA synthetase |
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| Protein accession | YP_613148 |
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| Protein GI | 99080994 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.102155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0430142 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGA TCAAATTGCA CAACTCAAAG ACCCGCAAGA AAGAGGTCTT TACGCCGATT
GATCCCGACA ATGTGCAAAT GTATGTCTGT GGCCCAACGG TTTATGATCG CGCGCATCTT
GGGAATGCCC GCCCGGTGGT GGTGTTTGAC GTTCTGTTTC GCCTGCTGCG CCACGTCTAT
GGCGACAAGA AAGTCACCTA CGCGCGCAAT TTCACCGACG TCGATGACAA GATCAACACT
CGCGCCGCCG AAAGCGGGCG CGCAATTGGC GAGATCACCT CGGAGACGAT CCAGTGGTTC
CTTGAGGATA TGGGCGCGCT TGGGGCGCTG CAGCCCACGC ATATGCCACG CGCCACGGAA
TACATCCCGC AGATGATCGC CATGATCGAA GAGTTGATCG CGCGCGATCA CGCCTATGAA
GCCGAGGGGC ATGTGCTCTT TGCGGTGGAC TCCTGGCGCG AAGGGTATGG GCAGCTCTCG
GGACGGTCGG TTGACGATAT GATCGCTGGC GCGCGGGTTG AGGTGGCACC CTACAAGAAA
AACCCGATGG ATTTTGTGCT CTGGAAGCCG TCGGATGCCG ACCAGCCGGG CTGGGAGAGC
CCATGGGGGC GGGGACGGCC GGGCTGGCAC ATCGAATGCT CTGCCATGAG TCATGATCTC
TTGGGCGAGA GTTTTGATAT TCATTGCGGT GGCAATGACC TGATGTTCCC GCACCATGAA
AACGAGATCG CCCAGAGCTG CTGTGCCAAC CCCGAAGGCG AGTTTGCGCG CTATTGGCTG
CACAATGAGA TGCTGCAGGT TGAGGGCAAG AAAATGTCTA AATCGCTGGG CAATTTCTTT
ACCGTGCGCG ATCTCCTGGA TCAGGGAATC CCGGGCGAGG TGGTGCGATT TGTGTTCCTG
CAGACCCACT ATCGAAAGCC GATGGACTGG ACCGAGAAGA AAGCCGCCGA GGCGGAGGCG
ACGTTGCGCA AGTGGCGGGC GCTGACAGCG GGCATCGAGC CCGCCGCCAC CGCAGCTGCC
GCGGTTGTGG ACGCGCTGTC GGATGATCTC AATACCGCAG GGGCGATTGC CGAGATGCAC
AAGCTGGCGG CGGCTGGCGA TGGTGCAGGG CTTTTGGCGG CTGGCCAACT GGTTGGCCTT
TTGGGCGATG AGATGGGCGA ATGGGCTGCT GCGCCCTCGG TGGATCTCTC GGCCCATGAG
GCGCGCCTGT TTAAGGCACG CCAGGCGGCC ATGGAGACCA AGGATTTCTC CGAGGTGGAT
CGCCTGAAGG CCGCCTATAC CGAGGCAGGG CTTGAGGTGC GCATGTCCAA AACCGGGGTG
GAATTGGTCC CGGGCGCAGG CTTTGACGCT GCAAAGCTGG AGGCGCTGTC GTGA
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| Protein sequence | MTTIKLHNSK TRKKEVFTPI DPDNVQMYVC GPTVYDRAHL GNARPVVVFD VLFRLLRHVY
GDKKVTYARN FTDVDDKINT RAAESGRAIG EITSETIQWF LEDMGALGAL QPTHMPRATE
YIPQMIAMIE ELIARDHAYE AEGHVLFAVD SWREGYGQLS GRSVDDMIAG ARVEVAPYKK
NPMDFVLWKP SDADQPGWES PWGRGRPGWH IECSAMSHDL LGESFDIHCG GNDLMFPHHE
NEIAQSCCAN PEGEFARYWL HNEMLQVEGK KMSKSLGNFF TVRDLLDQGI PGEVVRFVFL
QTHYRKPMDW TEKKAAEAEA TLRKWRALTA GIEPAATAAA AVVDALSDDL NTAGAIAEMH
KLAAAGDGAG LLAAGQLVGL LGDEMGEWAA APSVDLSAHE ARLFKARQAA METKDFSEVD
RLKAAYTEAG LEVRMSKTGV ELVPGAGFDA AKLEALS
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