| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1057 |
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| Symbol | |
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| ID | 4077197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1136156 |
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| End bp | 1137433 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638006361 |
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| Product | hypothetical protein |
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| Protein accession | YP_613052 |
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| Protein GI | 99080898 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5323] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0533808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGATC ACACATTGGC CGCGCTGCCC TATATGTTTG ATCTCTGGGC GCTCCCGCAT
CAGTGCCCCC CGCTGGGCGA CTGGCGCGCC TGGGTGATCC TTGGCGGGCG CGGGGCGGGG
AAGACGCGCG CCGGTGCGGA ATGGGTGCGC AGCCAGGTCG AGGGGGCAGG GCCCTTTGGC
GTCGGGTCTG CGCGTCGCGT GGCGCTGGTG GGGGAGACCT ATGATCAGGT ACGCGACGTG
ATGATCCACG GTGACAGCGG TATCCTTGCC TGTTCGCCAC CGGATCGACG CCCGGAGTGG
CGTGCGGGCG AACGCCGACT GCTCTGGCCC AACGGGGCAA GCGCGCAGGC GTTCTCGGCC
TCTGATCCAG AGGTGCTGCG TGGGCCGCAG TTCGATGCGG CCTGGGTTGA CGAGCTGGCC
AAGTGGCGCC GCGCACAGGA GGCCTGGGAC ATGTTGCAGT TTGCCCTGCG GCTTGGGACA
GCGCCGCGCG TCTGCGTCAC CACCACACCG CGCAATGTAC CCCTTCTGAA GGGGCTGCTT
CAAAGCCCCT CGACCGTCAC CACCCATGCC CCCACCGAGG CCAACAGCGC AAATCTTGCA
CCAAGTTTCC TCAGTGAAGT GCGGGCGCGC TATGCGGGCT CCCGACTGGC GCGGCAGGAG
CTTGATGGTG TCTTGCTTGC GGATGTGGAC GGCGCGCTCT GGAGCTCTGA CATGCTGGCA
GAGATTCAGC GGCGCGACAC CCCGCGTCTT GATCGCATCG TGGTGGCCGT CGACCCCTCG
GTGAGCGCGC ACAAGGGCTC TGATGCCTGC GGGATCATCG TTGCAGGCGC GCAGACACAG
GGGCCGATCT CGTCGTGGCG GGCCTATGTG CTGGCCGATC ATACGGTTCA GGGGCTTGGC
CCCACCGGCT GGGCACGGGC GGCGATTGCG GCGCGCGATG CCTACAAAGC GGACCGCCTG
GTGGCAGAGG TCAACCAAGG CGGCGCGCTG GTGGGCACGG TGTTGCGCCA GGTGGATCCC
TTGGTGCCTT TCACCCCGGT CCATGCCAGC AAAGGCAAGG CGGCGCGGGC GGAGCCCGTC
GCGGCGCTCT ATGAGCAGGG GCGCGTGCAT CATGCGCCGG GCCTGCAAGA GCTCGAAGAG
CAGATGTGCC TGATGACCGC GCAGGGCTAT CGCGGGGATG CATCGCCGGA TCGTGTGGAT
GCGCTGGTCT GGGCGCTGCA TGCGCTGATT ATCGGCCCGG CAGAGCAGCA TCGCTGCCCC
AAGATCCGCC GGCTCTGA
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| Protein sequence | MDDHTLAALP YMFDLWALPH QCPPLGDWRA WVILGGRGAG KTRAGAEWVR SQVEGAGPFG
VGSARRVALV GETYDQVRDV MIHGDSGILA CSPPDRRPEW RAGERRLLWP NGASAQAFSA
SDPEVLRGPQ FDAAWVDELA KWRRAQEAWD MLQFALRLGT APRVCVTTTP RNVPLLKGLL
QSPSTVTTHA PTEANSANLA PSFLSEVRAR YAGSRLARQE LDGVLLADVD GALWSSDMLA
EIQRRDTPRL DRIVVAVDPS VSAHKGSDAC GIIVAGAQTQ GPISSWRAYV LADHTVQGLG
PTGWARAAIA ARDAYKADRL VAEVNQGGAL VGTVLRQVDP LVPFTPVHAS KGKAARAEPV
AALYEQGRVH HAPGLQELEE QMCLMTAQGY RGDASPDRVD ALVWALHALI IGPAEQHRCP
KIRRL
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