| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1048 |
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| Symbol | |
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| ID | 4078106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1126856 |
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| End bp | 1127638 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006352 |
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| Product | ABC-type amino acid transport/signal transduction systems |
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| Protein accession | YP_613043 |
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| Protein GI | 99080889 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.163462 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAAAAG CCACCAGTTT TGTTGCCGCG CTCTCGCTGG CTCTGTTCCA GAGCCCGTCT
CATGCCAGCG CGGATGAGAT CACGATCCTC GCCGGAGATC TGCCGCCCAT GTTCAACGAG
GACGGCAGCG GGCGTGAGGC CGAGGTGATC TCTACCGTGA TGGAGCGATG CGGGCATACG
GTGACGTTTG AAATCCAGCC CTTCACCCGC CACTGGAAGA CCTATTCCAA TGGAACCGCT
GACGCCGTGG CCACCGTCCC CGTTGGCATG CCGCTCGGCG GCACCCAGAG CGATGTGTAT
GTGCAGTATC AAAACGGCGT GTCGTTCCTC AGCGAGGCGG GTGAGAGCTA TGGCGATCTT
GCCGCGCTTG CGGGCCATTC CGTGATCGCC TTTATGGGGG CGTCCGACAT TCTGCCGGGT
CTGAAGGACG CGGTCCCGAG CTTCAAGAGC TACAAGGAAA TCGCGGATCA GATCGGCCAG
AGCCGGATGA TCTTTGGCAA ACGCGTCGAT GCGGTTGTGG GCGATGGTAT GATCTTTGCC
GAATATAACC GCCAGCTGCG CGAGCAATCC GGCGATCTCA TGTTCGACCC CAATCAAAGC
GTGACCTTCC AGGCGATCTT TGCACCGTCG GATTATGCGA TGAACTTCCG GGATGCGGCG
CTCGCAGAGG ATTTCAACCG CTGCTATGCC GAGGCCAAGG CGGATGGCTC GATCGATGCG
ATCAACAAAG CCTGGGCGGA GCGCTATCGC GACACGCTCG GCACCCAGTA CCTCGGTCAT
TGA
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| Protein sequence | MLKATSFVAA LSLALFQSPS HASADEITIL AGDLPPMFNE DGSGREAEVI STVMERCGHT
VTFEIQPFTR HWKTYSNGTA DAVATVPVGM PLGGTQSDVY VQYQNGVSFL SEAGESYGDL
AALAGHSVIA FMGASDILPG LKDAVPSFKS YKEIADQIGQ SRMIFGKRVD AVVGDGMIFA
EYNRQLREQS GDLMFDPNQS VTFQAIFAPS DYAMNFRDAA LAEDFNRCYA EAKADGSIDA
INKAWAERYR DTLGTQYLGH
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