| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1033 |
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| Symbol | tig |
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| ID | 4078545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1112761 |
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| End bp | 1114092 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006337 |
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| Product | trigger factor |
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| Protein accession | YP_613028 |
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| Protein GI | 99080874 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.201113 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTCA CCGAAACTCT GAACGAAGGT CTGAAGCGCG GCTACGCGAT CACCATTCCG
GCAACCGAGT TGGAAGAAAA GGTCAACGCG AAACTGGCCG AAGCGCAGCC CGAGATCGAG
ATGAAGGGCT TCCGCAAGGG CAAGGTGCCG ATGCCGCTTC TGAAGAAGCA GTTCGGCGCG
CGCCTGATGG GCGAAGTCAT GCAGGAAGCT GTCGATGGTG CGATGAACAA GCACTTTGAA
GAATCCGGCG ACCGTCCGGC GCTCCAGCCC GACGTCAAAA TGACCAACGA AGACTGGAAA
GAGGGCGACG ACGTCAACGT CGAGATGTCC TATGAAGCGC TGCCCGCGAT CCCCGAGGTC
GACGTATCCG GCGTGGAACT GGAAAAGCTC GTTGTCAAAG CCGAAGACGC AGCCGTGACC
GAGGCGCTCG AAAACCTGGC GTCCTCCGCT CAGGAATTTG AAGCCCGCGA AGAAGGTGCT
GCATCCGAGG ATGGCGATCA GGTTGTGATC GACTTCGTCG GCAAAGTGGA CGGCGAAGCG
TTCGACGGCG GCTCTGCCGA AGATTACCCG CTGACGCTGG GCTCCAACTC CTTCATCCCC
GGCTTCGAAG AGCAGCTGGT TGGCGTGAAG GCAGGCGACG CAAAAGACGT TACCGTGACC
TTCCCCGAAG AATACGGCGC CGAGCACCTT GCTGGCAAAG AAGCCGTGTT CTCCTGCACC
GTCAAAGAAG TCAAAGCCCC CAAAGCGGCC GAGATCAACG ACGAGCTGGC GAAGAAATTC
GGTGCCGAGG ATCTCGATCA GCTCAAAGGT CAGATCTCCG AGCGTCTCGA AGCAGAATAC
GCCGGTGCCG CCCGTCAGGT GATGAAGCGC GCCGCGCTTG ACGCCCTGGC CGAGCTGGTC
TCCTTCGACC TGCCGCCGAG CCTCGTTGAG GCCGAAGCCA AGCAGATCGC ACATCAGCTG
TGGCACGAGG AAAACCCGGA CGTGCAGGGC CACGATCACC CGGAAATCGA GCCCACCGAT
GAGCACAACA AACTGGCCGA ACGTCGCGTG CGCCTTGGTC TGCTGCTCGC CGAAATGGGT
CAGAAAGCCG AAGTCGAAGT GACCGACCAG GAAATGACCC AGGCGATCAT GCAGCAGGCA
CGTCAGTACC CGGGCCAAGA ACGTCAGTTC TTTGAGTTCA TCCAGCAGAA CGCCCAGATG
CAGCAGCAGC TGCGTGCGCC GATCTTCGAA GACAAAGTGA TCGATCTCGT GTTCGATCAG
GCAAAAGTGT CTGAAAAAGA AGTCTCCAAA GAAGACCTGC AGAAAGCCGT TGAGGCACTC
GAAGAAGAGT AA
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| Protein sequence | MQVTETLNEG LKRGYAITIP ATELEEKVNA KLAEAQPEIE MKGFRKGKVP MPLLKKQFGA
RLMGEVMQEA VDGAMNKHFE ESGDRPALQP DVKMTNEDWK EGDDVNVEMS YEALPAIPEV
DVSGVELEKL VVKAEDAAVT EALENLASSA QEFEAREEGA ASEDGDQVVI DFVGKVDGEA
FDGGSAEDYP LTLGSNSFIP GFEEQLVGVK AGDAKDVTVT FPEEYGAEHL AGKEAVFSCT
VKEVKAPKAA EINDELAKKF GAEDLDQLKG QISERLEAEY AGAARQVMKR AALDALAELV
SFDLPPSLVE AEAKQIAHQL WHEENPDVQG HDHPEIEPTD EHNKLAERRV RLGLLLAEMG
QKAEVEVTDQ EMTQAIMQQA RQYPGQERQF FEFIQQNAQM QQQLRAPIFE DKVIDLVFDQ
AKVSEKEVSK EDLQKAVEAL EEE
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