| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0960 |
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| Symbol | |
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| ID | 4077256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1026394 |
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| End bp | 1027038 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006263 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_612955 |
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| Protein GI | 99080801 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGTG TAAACGGGTT TAATATCAAT ATGCGTATTC TTCTCGCCGA CGATCACGAT
ATGGTGCGCG ACACGATTTC TGCCTATCTC GCTTCCGAGG GCGGCGCGCA AATCACTGCG
ACCACTGATC TGCCTCGCGC CATGAAGGAA CTTGAAGACA ACGGTCCCTT TGACCTGGTG
CTTCTGGACT ACAATATGCC GGGCATGAAC GGGCTCGATG GGCTTCAGCG TGCGCTAAAG
GCCAATGGCG GGCGTGGCGT TGCAATCCTC TCGGGCAGCG CACCGACGCG CACCGCACAG
GATGCTTTGG ACGCCGGTGC CATCGGTTTC ATCCCCAAGA CCATGGGCGC GCAGTCGCTT
TTGAATGCGG TGCGTTTCAT GAGCGCGGGA GAAATCTATG TGCCGGTCGA ACTGATGCGC
GAAGAGGCCT CCGCCCCGGA GCATCCGCTC CTGGCCCAAC TCAGCCCCCG CGAGGTCGAA
GTTCTGAGTG GGCTCTGTCG CGGGCAATCC AACAAGGAAA TCGCACGCGA TCTCAACCTT
CAAGAGGTGA CGATCAAGCT GCATGTGCGC ACGCTCTGCC GCAAGCTCGA CGCAAAGAAC
CGCACGCAGG CCGCAATGAC CGCCAAAGAA GCAGGGTTGT TCTAA
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| Protein sequence | MNSVNGFNIN MRILLADDHD MVRDTISAYL ASEGGAQITA TTDLPRAMKE LEDNGPFDLV
LLDYNMPGMN GLDGLQRALK ANGGRGVAIL SGSAPTRTAQ DALDAGAIGF IPKTMGAQSL
LNAVRFMSAG EIYVPVELMR EEASAPEHPL LAQLSPREVE VLSGLCRGQS NKEIARDLNL
QEVTIKLHVR TLCRKLDAKN RTQAAMTAKE AGLF
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