| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0937 |
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| Symbol | |
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| ID | 4077565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 999907 |
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| End bp | 1001070 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006240 |
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| Product | peptidase M20D, amidohydrolase |
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| Protein accession | YP_612932 |
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| Protein GI | 99080778 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.47047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0807888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTCG TGAACCGCAT CGCTGATTTT GCCGAAGACA TGAAGACCTG GCGTCGCCAC
CTGCACCAGA TCCCCGAACT GGGGTTGGAC ACAGTAAAAA CCGCTGCATA TGTGACTGAG
ATCCTTGAGA CATTCGGCGT AGATGAGATC CACGGCGGTA TTGCGCAGAA CGGGATCGTG
GCGATCATCA ACGGTCAGGG CGAAGGGCCA ACACTTGGGC TTCGCGCCGA TATGGACGCG
CTGCCGATCA CCGAGGTGCG CGACCTCGAC TACAAATCCC AGACCCCCGG CAAAATGCAT
GCCTGCGGCC ATGACGGGCA CACCACCATG TTGCTCGGGG CGGCGAAATA TCTGGCGGAA
ACGCGTAATT TCAAAGGCCG CGTGGCGCTG TTGTTCCAGC CCGCCGAAGA GATCATCGGC
GGCGCCAAGA TCATGGTCGA AGAGGGCGTG ATGGAGCGCT TTGACATCAA GGAGGTCTAC
GCGCTGCACA ATGCGCCGGG CTTGCCGGTC GGGCATTTCA TGACAACGCC GGGCGCTTTG
ATGGCGGCGG TGGATGAGTT TACCATCAAC ATCAAAGGGC TGGGTGGCCA TGGCGCAATG
CCGCATGAAA CCCGTGATCC GGTGATGGCC GCCTGTGGCA TGGCGCAAGC GATCCAGACC
ATCGTCAGCC GCAACCATCA GGCCACCGAA GATCTGGTGA TCTCCGTCAC CCAGATCCAC
ACTGGTACCG TCGACAATGT GATCCCCGAG ACCGCCTATG TGAATGGCAC CATCCGCACC
TTCAATCCCG AGGTGCAAAA GATGGTCATG GCGCGCTTTG ACGAGATCGT GAAAGGCTGC
GCCGTGGCCT ATGGGGTGGA AGCGGAGCTG GATTACGAGG TCGGCTATCC CGCCACGATC
AACGACGCGG AAAAGGCGGC TTTTGCCACC GATATCGCGC GCGACATCTC GGGCGAGGCC
AATGTGCAGG GCGATGCGGG GCGCGAGATG GGGGCTGAGG ATTTCTCTTA TATGCTGGAG
GCCCGTCCGG GCGCCTACCT GTTCCTCGGG CAGGGGGATA CGGCGGGGCT GCACCACCCT
GAGTATGACT TCAACGACGA GATCTCGCCT ATTGGGGCAT CGTTCTTTGC CCGTCTGGTG
GAGAAAGCAC AGCCAGCGGG TTGA
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| Protein sequence | MPVVNRIADF AEDMKTWRRH LHQIPELGLD TVKTAAYVTE ILETFGVDEI HGGIAQNGIV
AIINGQGEGP TLGLRADMDA LPITEVRDLD YKSQTPGKMH ACGHDGHTTM LLGAAKYLAE
TRNFKGRVAL LFQPAEEIIG GAKIMVEEGV MERFDIKEVY ALHNAPGLPV GHFMTTPGAL
MAAVDEFTIN IKGLGGHGAM PHETRDPVMA ACGMAQAIQT IVSRNHQATE DLVISVTQIH
TGTVDNVIPE TAYVNGTIRT FNPEVQKMVM ARFDEIVKGC AVAYGVEAEL DYEVGYPATI
NDAEKAAFAT DIARDISGEA NVQGDAGREM GAEDFSYMLE ARPGAYLFLG QGDTAGLHHP
EYDFNDEISP IGASFFARLV EKAQPAG
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