Gene TM1040_0904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0904 
Symbol 
ID4076274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp965892 
End bp966827 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content66% 
IMG OID638006206 
Productsporulation related 
Protein accessionYP_612899 
Protein GI99080745 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCGT TTCTGGGCGC TGCGGCCTCG CTGGCACTGG TGGTGAGCAT CTCCATGTGG 
GGCTACAAGC TGATCATGCG CGATGTCTCC GGCGTGCCGG TGGTCAGCGC GCTTTCGGGG
CCGATGCGCG TGGCGCCGGA AAACCCGGGC GGGGAACTTG CAGACAATCA AGGGCTTGCA
GTGAACTCCG TGGCCGCAAA CGGGATTGCC GAAGATCCCG CCGACCGCTT GCAGCTGGCA
CCGCAGGCGA TTTCGCTCAC CGAAGACGAC CAGCCGATCC CGGTTCTGAC AGAGGCCGCC
GAAGCCCAGG CCGCACTGGA GGCCGAAGCG CTGGCCCCGG CGGTTGAGCG GGAAACCGCA
GCGATTGAGG CGGGCAATGA TGTCTCGCCG CTCGAGCAGC GCAGCAATGA TATCGACGCG
TTGGTGGCAT CGCTCACCGA AGGGGCGGTT CCGCTTGAGG ATCTGCGTGA GACTTCGGCA
TCGATCACCC AGCCAGAACC GCTTGCGGCG GCTGAGGTTG CGGCGATCAC CACGGTACCG
GCGGCTGTCC GCAATGCGCC CGGCGTGCGC GAAACCCCGC GCCCAATGGT GCGCCCGGCG
CGGTTTGCGC CTGCGCCCGC AGCCAGTGCA GACACCACAC AAGCCGCGCG CGCCGCGGTT
GATATTGACC CCAAGAGCCT TGAGGTCGGG ACCCGTCTGG CACAGCTAGG CGCCTATGAG
AGTGCCGAGG TGGCGCGCAG CGAATGGACC CGCATCAGCG CCAAGTTTGG TGACTTCTTT
GACGACAAGG CCCGCGTGGT CCAGCGCGCC GAGAGCGGTG GGCGAATCTT CTACCGGTTG
CGCGCACATG GGTTTGAAGA CCTGTCGGAC GCGCGCCGCT TCTGCTCGGC GCTGGTGGCG
GGCAATGCAG ATTGTATCCC TGTGACGATG CGCTGA
 
Protein sequence
MAAFLGAAAS LALVVSISMW GYKLIMRDVS GVPVVSALSG PMRVAPENPG GELADNQGLA 
VNSVAANGIA EDPADRLQLA PQAISLTEDD QPIPVLTEAA EAQAALEAEA LAPAVERETA
AIEAGNDVSP LEQRSNDIDA LVASLTEGAV PLEDLRETSA SITQPEPLAA AEVAAITTVP
AAVRNAPGVR ETPRPMVRPA RFAPAPAASA DTTQAARAAV DIDPKSLEVG TRLAQLGAYE
SAEVARSEWT RISAKFGDFF DDKARVVQRA ESGGRIFYRL RAHGFEDLSD ARRFCSALVA
GNADCIPVTM R