| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0732 |
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| Symbol | |
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| ID | 4076102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 789814 |
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| End bp | 790977 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006029 |
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| Product | isovaleryl-CoA dehydrogenase |
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| Protein accession | YP_612727 |
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| Protein GI | 99080573 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAACG CAAGCATGAC ATTCGATCTA GGCGAGGACG TAAACGCCCT GCGCGACATG
GTGCACCGCT GGGCGCAGGA GCGCGTCAAA CCGATGGCGC AGGAGATCGA CCAGAAAAAC
GAATTCCCCG CCGAGCTCTG GAAAGAGATG GGCGAGCTGG GTCTTCTGGG CATCACCGTG
GATGAGGAGT TTGGCGGCGC GGGCATGTCC TATCTGGCGC ATACCGTCGC GGTCGAGGAA
ATCGCGCGGG CCTCGGCCTC CGTATCGCTG TCTTACGGCG CGCATTCCAA CCTTTGCGTC
AACCAGATCA AGCTCAACGG CAATGCCGAG CAAAAAGCCA AATACCTGCC GCGCCTCATT
TCTGGCGAAC ATGTGGGCGC GCTGGCAATG TCCGAGGCTG GCGCGGGTTC CGACGTGGTT
TCGATGTCGC TGCGCGCCGA AAAGCGCAAC GACCGCTTTG TTCTGAACGG CAACAAATAC
TGGATCACCA ATGGTCCTGA CGCGGACACG CTGGTGGTCT ATGCCAAGAC TGATCCAGGG
GCGGGCTCCA AAGGCATCAC CGCCTTCCTG ATCGAGAAGG AATTCAAGGG CTTTTCCACC
TCCAAGCATT TCGACAAGCT TGGCATGCGT GGCTCAAACA CCGCGGAGCT GGTCTTTGAG
GATGTGGAAG TTCCGTTTGA AAACGTGCTT GGCGAAGAGG GCAAGGGCGT ACGCGTCCTG
ATGTCCGGTC TGGATTACGA ACGCGTGGTG CTTGCGGGGA TCGGCACCGG CATCATGGCC
TCCTGCATGG ATGAGATGAT GCCCTATATG GCCGAACGCA AACAATTTGG CCAACCCATC
GGGAACTTCC AGCTGATGCA GGGCAAGATC GCGGATATGT ACACTGCGAT GAACACCGCA
CGCGCCTACG TCTATGAGGT CGCCAAGGCT TGCGACAAGG GCACCGTGAC CCGTCAGGAT
GCGGCGGCCT GCTGTCTCTA CGCCTCTGAG GTGGCGATGA CGCAGGCGCA TCAGGCGGTA
CAGGCCTTTG GCGGGGCGGG TTATCTGAGC GACAATCCGG TCGGTCGGAT CTTCCGCGAT
GCCAAGCTGA TGGAGATCGG AGCGGGCACG TCAGAAATTC GACGCATGCT GATCGGGCGC
GAGTTGATGG GCCATATGAG CTAA
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| Protein sequence | MFNASMTFDL GEDVNALRDM VHRWAQERVK PMAQEIDQKN EFPAELWKEM GELGLLGITV
DEEFGGAGMS YLAHTVAVEE IARASASVSL SYGAHSNLCV NQIKLNGNAE QKAKYLPRLI
SGEHVGALAM SEAGAGSDVV SMSLRAEKRN DRFVLNGNKY WITNGPDADT LVVYAKTDPG
AGSKGITAFL IEKEFKGFST SKHFDKLGMR GSNTAELVFE DVEVPFENVL GEEGKGVRVL
MSGLDYERVV LAGIGTGIMA SCMDEMMPYM AERKQFGQPI GNFQLMQGKI ADMYTAMNTA
RAYVYEVAKA CDKGTVTRQD AAACCLYASE VAMTQAHQAV QAFGGAGYLS DNPVGRIFRD
AKLMEIGAGT SEIRRMLIGR ELMGHMS
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