| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0731 |
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| Symbol | |
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| ID | 4076101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 788430 |
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| End bp | 789647 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006028 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_612726 |
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| Protein GI | 99080572 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTGC CCATGACAGA GCGTTTTACC GGCAATTTCA CCCAGCAAGA CCCCATCCCC
GAGGAGGCCA TCGCTGCCGC CGTCGAGGTA ATGCGCCACG GGCGCATCCA TCGCTACAAC
CTCGCCGGAG AGGAACAGGG CGAAACCGCG TTGCTGGAAC AGGAATTTGC GCAGCTGATG
GGGGCAAAAT ACTGCCTTGC GGTCGCGTCC GGGGGCTATG CGCTTGCCAC TGCGCTGCGC
GCCGTTGGGG TGGGGCATGG GGACAAAGTG CTCACTAACG CGTTCACATT GGCGCCGGTG
CCGGGGGCGA TTGCATCGGT CGGCGCAGAG CCGGTGTATG TTGATGTGAC CGAGGATCTG
ACCATCGATC TCGACGACCT CAAGGCCAAG GCGGGCGAGG CAAAGGTCTT GATGCTCAGT
CATATGCGCG GCCACCTTTG CGATATGGAT CACCTGATGG AAATCTGCAC CGCCGCTGGT
GTAACCGTCA TCGAGGATTG CGCGCATACG ATGGGGGCCA GCTGGAATGG CACACCATCC
GGGCGCCATG GCCTGATCGG GTGCTATTCC TGCCAGACCT ACAAACATGT GAACTCTGGC
GAAGGCGGGC TTTTGATCAC CGACGATGCA GACGTCGCGG CTCGGGCCAT TATGCTCTCT
GGGTCCTACA TGCTCTATTC GCGCCATCTG GCGGCACCTG AGCCTGAAGT GTTCGAGCGG
GTGAAATACG AGACGCCCAA TATCTCGGGT CGCATGGACA ACCTGCGCGC CGCGATCCTG
CGGCCGCAAC TGCGCGACCT TGATGCGCAG GTGGCACGCT GGAACGATCG CTACCGCACG
CTTGAGGCCG GGGTGAGGGA CACACCGGGC CTACGTGTTG TGGAGCGTCC GGAGGCCGAA
ATCTATGTAG GCTCGTCCTT TCAGTTCCTG CTTCTGGATT GGGCGCCGGA GGCGGTCCAA
GACGTGCTCT CGCGCTGTGC AGCACGCGGC GTGGAGCTCA AATGGTTTGG CGGGGCTGAG
CCTGTCGCCT TTACCTCGCG CTATGATAGT TGGCGCTATG CGCCCGCGCA GAGCCTGCCA
AAAAGCGACC GCATCCTTGC AGGCATCCTC GATATGCGCG TGCCGTTGAC CTTTAGTCTT
GAGGATTGCG CGCTCATTGC CCGCATCATT CGCGCAGAGG TCAGCGCCGT CTGGCAGGCG
CAGGGGCAGC AGGTCTAA
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| Protein sequence | MTLPMTERFT GNFTQQDPIP EEAIAAAVEV MRHGRIHRYN LAGEEQGETA LLEQEFAQLM
GAKYCLAVAS GGYALATALR AVGVGHGDKV LTNAFTLAPV PGAIASVGAE PVYVDVTEDL
TIDLDDLKAK AGEAKVLMLS HMRGHLCDMD HLMEICTAAG VTVIEDCAHT MGASWNGTPS
GRHGLIGCYS CQTYKHVNSG EGGLLITDDA DVAARAIMLS GSYMLYSRHL AAPEPEVFER
VKYETPNISG RMDNLRAAIL RPQLRDLDAQ VARWNDRYRT LEAGVRDTPG LRVVERPEAE
IYVGSSFQFL LLDWAPEAVQ DVLSRCAARG VELKWFGGAE PVAFTSRYDS WRYAPAQSLP
KSDRILAGIL DMRVPLTFSL EDCALIARII RAEVSAVWQA QGQQV
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