Gene TM1040_0621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0621 
Symbol 
ID4078134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp660413 
End bp660676 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content58% 
IMG OID638005918 
Producthypothetical protein 
Protein accessionYP_612616 
Protein GI99080462 
COG category[S] Function unknown 
COG ID[COG2960] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGG AGATGGCCAT GCAGACCCGC AACAAGATTA TGGACGACAT TTCGCAACTG 
ATGACCAACG CTATGGGCGT GGCGCAGGGG GCGAAAGACG AAGCCGAAAC CGCGATGAAA
AGCATGATTG ATCGCTGGCT CGCAGATCGC GATTTCGTGA CCCGCGAAGA GTTCGACGCC
GTACGCGCCA TGGCACAGAA AGCGCGCGAG GAAAACGAAG CGCTGAAGGC GCGTCTGGAC
GCGCTCGAAA CTAAGGCCGA CTAA
 
Protein sequence
MNREMAMQTR NKIMDDISQL MTNAMGVAQG AKDEAETAMK SMIDRWLADR DFVTREEFDA 
VRAMAQKARE ENEALKARLD ALETKAD