Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0621 |
Symbol | |
ID | 4078134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 660413 |
End bp | 660676 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638005918 |
Product | hypothetical protein |
Protein accession | YP_612616 |
Protein GI | 99080462 |
COG category | [S] Function unknown |
COG ID | [COG2960] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGGG AGATGGCCAT GCAGACCCGC AACAAGATTA TGGACGACAT TTCGCAACTG ATGACCAACG CTATGGGCGT GGCGCAGGGG GCGAAAGACG AAGCCGAAAC CGCGATGAAA AGCATGATTG ATCGCTGGCT CGCAGATCGC GATTTCGTGA CCCGCGAAGA GTTCGACGCC GTACGCGCCA TGGCACAGAA AGCGCGCGAG GAAAACGAAG CGCTGAAGGC GCGTCTGGAC GCGCTCGAAA CTAAGGCCGA CTAA
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Protein sequence | MNREMAMQTR NKIMDDISQL MTNAMGVAQG AKDEAETAMK SMIDRWLADR DFVTREEFDA VRAMAQKARE ENEALKARLD ALETKAD
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